RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CREB3L4Q8TEY5 395 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 APH1BQ8WW43 257 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 OR1E3Q8WZA6 343 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 RARRES3Q9UL19 164 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 NSA2O95478 260 aaKnown RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 FUT1P19526 365 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 POLR2HP52434 150 aaKnown RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 CASP6P55212 293 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 MFGE8Q08431 387 aaPredicted RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 TSPAN31Q12999 210 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 GRM7Q14831 915 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 ARHGAP11BQ3KRB8 267 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 ANKRD34AQ69YU3 496 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 FBXW12Q6X9E4 464 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 ZNF534Q76KX8 674 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 MDGA2Q7Z553 956 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 METTL27Q8N6F8 245 aaPredicted RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 EID2Q8N6I1 236 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 BADQ92934 168 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 NDRG4Q9ULP0 352 aaKnown RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 SCO2O43819 266 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 FABP4P15090 132 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 FGF7P21781 194 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 EMP2P54851 167 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 SIRPAP78324 504 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 ZNF836Q6ZNA1 936 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 AMIGO3Q86WK7 504 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 BPIFCQ8NFQ6 507 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 KHSRPQ92945 711 aaKnown RBP eCLIP9.71□□□□□ -0.851e-6■■■□□ 16.2
VCL-201ENST00000211998 ZNF566Q969W8 418 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 FAM71F1Q96KD3 344 aaPredicted RBP9.71□□□□□ -0.85
VCL-201ENST00000211998 SLC25A21Q9BQT8 299 aaPredicted RBP9.71□□□□□ -0.85
VCL-201ENST00000211998 HINT2Q9BX68 163 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 ZNF385DQ9H6B1 395 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 NCDNQ9UBB6 729 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 POMT2Q9UKY4 750 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 CSAG2Q9Y5P2 127 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.71□□□□□ -0.85
VCL-201ENST00000211998 TMEM200CA6NKL6 621 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 HIDE1A8MVS5 230 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 CYBAP13498 195 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 MGMTP16455 207 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 RAB28P51157 221 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 WNT7BP56706 349 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 UBE2MP61081 183 aaKnown RBP9.71□□□□□ -0.85
VCL-201ENST00000211998 RAB11AP62491 216 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 AARDQ4LEZ3 155 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 C9orf152Q5JTZ5 239 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 ENTPD8Q5MY95 495 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 ZNF852Q6ZMS4 543 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 ZNF611Q8N823 705 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 TMEM18Q96B42 140 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 MRPL38Q96DV4 380 aaKnown RBP9.71□□□□□ -0.85
VCL-201ENST00000211998 NDUFB11Q9NX14 153 aa9.71□□□□□ -0.85
VCL-201ENST00000211998 KCNK5O95279 499 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 PTBP3O95758 552 aaKnown RBP9.71□□□□□ -0.86
VCL-201ENST00000211998 LDLRAD1Q5T700 205 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 KCTD11Q693B1 232 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 FAM199XQ6PEV8 388 aaPredicted RBP9.71□□□□□ -0.86
VCL-201ENST00000211998 B3GNT9Q6UX72 402 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 TMPPEQ6ZT21 453 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 CCDC190Q86UF4 302 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 OR52I2Q8NH67 350 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 CPNE4Q96A23 557 aaPredicted RBP9.71□□□□□ -0.86
VCL-201ENST00000211998 TRMT2BQ96GJ1 504 aaKnown RBP9.71□□□□□ -0.86
VCL-201ENST00000211998 SENP5Q96HI0 755 aaPredicted RBP9.71□□□□□ -0.86
VCL-201ENST00000211998 CCDC74BQ96LY2 380 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 NOX4Q9NPH5 578 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 OSGIN2Q9Y236 505 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 MYH13Q9UKX3 1938 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 ZNF98A6NK75 572 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 HHLA1C9JL84 531 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 SIGLEC6O43699 453 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 UGDHO60701 494 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 ZNF28P17035 718 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 SDHAP31040 664 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 SNCAP37840 140 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 EVX1P49640 407 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 MAP2K6P52564 334 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 RAB31Q13636 194 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 IAH1Q2TAA2 248 aaPredicted RBP9.71□□□□□ -0.86
VCL-201ENST00000211998 SLIRPQ9GZT3 109 aaKnown RBP9.71□□□□□ -0.86
VCL-201ENST00000211998 MED17Q9NVC6 651 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 CROCCQ5TZA2 2017 aa9.71□□□□□ -0.86
VCL-201ENST00000211998 DLG5Q8TDM6 1919 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 ZFP92A6NM28 416 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 GABARAPH6UMI1 98 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 TGM5O43548 720 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 PAPLNO95428 1278 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 HNF1AP20823 631 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 GABRR1P24046 479 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 SNRPGP62308 76 aaKnown RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 RPS15P62841 145 aaKnown RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 H3F3AP84243 136 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 TESK1Q15569 626 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 PHYHD1Q5SRE7 291 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 PM20D1Q6GTS8 502 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 OR5M10Q6IEU7 315 aa9.7□□□□□ -0.86
VCL-201ENST00000211998 C12orf76Q8N812 135 aaPredicted RBP9.7□□□□□ -0.86
VCL-201ENST00000211998 ZNF596Q8TC21 504 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms