RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 MROQ9BYG7 248 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NXF2Q9GZY0 626 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PROK2Q9HC23 129 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 AKAP13Q12802 2813 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PRR23D1E9PI22 279 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CCRL2O00421 344 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ARPC3O15145 178 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RAB36O95755 333 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PRR23D2P0DMB1 279 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OXA1LQ15070 435 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ALG10Q5BKT4 473 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RNLSQ5VYX0 342 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NANOGNBQ7Z5D8 188 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 GID4Q8IVV7 300 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FADS6Q8N9I5 356 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 LRRC75AQ8NAA5 344 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SLC37A3Q8NCC5 494 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 STK35Q8TDR2 534 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PPP1R14BQ96C90 147 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 KLHL1Q9NR64 748 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 H2AFY2Q9P0M6 372 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SHISA8B8ZZ34 492 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CD82P27701 267 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RPL18Q07020 188 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SLC25A53Q5H9E4 307 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ACER2Q5QJU3 275 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SLC22A10Q63ZE4 541 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SHFQ7M4L6 423 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ASCL5Q7RTU5 278 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MDGA2Q7Z553 956 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ZNF554Q86TJ5 538 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OR52E2Q8NGJ4 325 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OR4K13Q8NH42 304 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NTNG2Q96CW9 530 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ANGPTL4Q9BY76 406 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FGF20Q9NP95 211 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RYDENQ9NUL5 291 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ANKRD10Q9NXR5 420 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SEC14L4Q9UDX3 406 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NCKAP5O14513 1909 aa17.79■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FUOMA2VDF0 154 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PROB1E7EW31 1015 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MT-ATP6P00846 226 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 IFNGP01579 166 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RBMS1P29558 406 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RPS3AP61247 264 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ERVK-25P63136 954 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PAQR6Q6TCH4 344 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 C5orf46Q6UWT4 87 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SDR9C7Q8NEX9 313 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 KBTBD8Q8NFY9 601 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RELTQ969Z4 430 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SLC25A36Q96CQ1 311 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MRGPRX4Q96LA9 322 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SGCZQ96LD1 299 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ASCL3Q9NQ33 180 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 IRGMA1A4Y4 181 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 GPX5O75715 221 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 F13BP05160 661 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SCG5P05408 212 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CLUP10909 449 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NOVA1P51513 510 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TGIF1Q15583 401 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DCAF10Q5QP82 559 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 B3GLCTQ6Y288 498 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MEPCEQ7L2J0 689 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FAM122BQ7Z309 247 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OR4F15Q8NGB8 312 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 KISS1RQ969F8 398 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 C1GALT1C1Q96EU7 318 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 THOC3Q96J01 351 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ARL5BQ96KC2 179 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DAPK2Q9UIK4 370 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 A3GALT2U3KPV4 340 aa17.78■□□□□ 0.44
TNFRSF1A-201ENST00000162749 LAMA5O15230 3695 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 HIST1H2ABP04908 130 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CD14P08571 375 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SLC2A5P22732 501 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 KLHL12Q53G59 568 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 HIST3H2AQ7L7L0 130 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MAMDC2Q7Z304 686 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PLCZ1Q86YW0 608 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NANOGP1Q8N7R0 232 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OR4K17Q8NGC6 315 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 POC1BQ8TC44 478 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 HIST1H2ACQ93077 130 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RASD2Q96D21 266 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PTGES2Q9H7Z7 377 aa17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CCDC59Q9P031 241 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1A-201ENST00000162749 EFNA2O43921 213 aa17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 AHSA1O95433 338 aa17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 IL11P20809 199 aa17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 ETV1P50549 477 aa17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 PPP5CP53041 499 aa17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 SPHARQ15513 63 aa17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 SLC6A19Q695T7 634 aa17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 FAM98AQ8NCA5 519 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 PROKR2Q8NFJ6 384 aa17.76■□□□□ 0.43
TNFRSF1A-201ENST00000162749 MND1Q9BWT6 205 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms