RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CFL1P23528 166 aaKnown RBP12.01□□□□□ -0.49
CTNS-201ENST00000046640 CD38P28907 300 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 RBMS1P29558 406 aaKnown RBP12.01□□□□□ -0.49
CTNS-201ENST00000046640 FNTBP49356 437 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 HES5Q5TA89 166 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 SHISA6Q6ZSJ9 500 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ZNF527Q8NB42 609 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 MOSPD2Q8NHP6 518 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 LRRC20Q8TCA0 184 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 THAP4Q8WY91 577 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 SGTBQ96EQ0 304 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 TCTN2Q96GX1 697 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.01□□□□□ -0.49
CTNS-201ENST00000046640 SLC25A18Q9H1K4 315 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 MKKSQ9NPJ1 570 aaPredicted RBP12.01□□□□□ -0.49
CTNS-201ENST00000046640 PRDM9Q9NQV7 894 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 GLTPQ9NZD2 209 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 ZNF224Q9NZL3 707 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 GNG8Q9UK08 70 aa12.01□□□□□ -0.49
CTNS-201ENST00000046640 THADAQ6YHU6 1953 aa12□□□□□ -0.49
CTNS-201ENST00000046640 A0A0G2JK05 382 aa12□□□□□ -0.49
CTNS-201ENST00000046640 SRPX2O60687 465 aaPredicted RBP12□□□□□ -0.49
CTNS-201ENST00000046640 HPXP02790 462 aa12□□□□□ -0.49
CTNS-201ENST00000046640 F13BP05160 661 aa12□□□□□ -0.49
CTNS-201ENST00000046640 H2AFB2P0C5Z0 115 aa12□□□□□ -0.49
CTNS-201ENST00000046640 SLC2A5P22732 501 aa12□□□□□ -0.49
CTNS-201ENST00000046640 DNASE1P24855 282 aa12□□□□□ -0.49
CTNS-201ENST00000046640 ACSM1Q08AH1 577 aa12□□□□□ -0.49
CTNS-201ENST00000046640 ELOCQ15369 112 aa12□□□□□ -0.49
CTNS-201ENST00000046640 APOOLQ6UXV4 268 aa12□□□□□ -0.49
CTNS-201ENST00000046640 LINGO2Q7L985 606 aa12□□□□□ -0.49
CTNS-201ENST00000046640 YIPF5Q969M3 257 aa12□□□□□ -0.49
CTNS-201ENST00000046640 DERL3Q96Q80 235 aa12□□□□□ -0.49
CTNS-201ENST00000046640 OR14A2Q96R54 314 aa12□□□□□ -0.49
CTNS-201ENST00000046640 OR10A4Q9H209 315 aa12□□□□□ -0.49
CTNS-201ENST00000046640 TEX46H3BTG2 121 aa12□□□□□ -0.49
CTNS-201ENST00000046640 H7C1C5 153 aa12□□□□□ -0.49
CTNS-201ENST00000046640 KHNYNO15037 678 aaKnown RBP12□□□□□ -0.49
CTNS-201ENST00000046640 NDUFB2O95178 105 aa12□□□□□ -0.49
CTNS-201ENST00000046640 CFDP00746 253 aaPredicted RBP12□□□□□ -0.49
CTNS-201ENST00000046640 BTG1P62324 171 aa12□□□□□ -0.49
CTNS-201ENST00000046640 LCN6P62502 163 aa12□□□□□ -0.49
CTNS-201ENST00000046640 SNTB2Q13425 540 aaKnown RBP12□□□□□ -0.49
CTNS-201ENST00000046640 RIN1Q13671 783 aa12□□□□□ -0.49
CTNS-201ENST00000046640 LGALSLQ3ZCW2 172 aaPredicted RBP12□□□□□ -0.49
CTNS-201ENST00000046640 PYHIN1Q6K0P9 492 aa12□□□□□ -0.49
CTNS-201ENST00000046640 RPL13AP3Q6NVV1 102 aa12□□□□□ -0.49
CTNS-201ENST00000046640 CHMP1BQ7LBR1 199 aa12□□□□□ -0.49
CTNS-201ENST00000046640 ZNF595Q8IYB9 648 aa12□□□□□ -0.49
CTNS-201ENST00000046640 SNX33Q8WV41 574 aa12□□□□□ -0.49
CTNS-201ENST00000046640 SCMH1Q96GD3 660 aa12□□□□□ -0.49
CTNS-201ENST00000046640 ADOQ96SZ5 270 aa12□□□□□ -0.49
CTNS-201ENST00000046640 DMDP11532 3685 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 OR6C68A6NDL8 312 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 B8ZZF3 427 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 IFNGP01579 166 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 M6PRP20645 277 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 PTBP1P26599 531 aaKnown RBP eCLIP11.99□□□□□ -0.49
CTNS-201ENST00000046640 AQP2P41181 271 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 RPS27P42677 84 aaKnown RBP11.99□□□□□ -0.49
CTNS-201ENST00000046640 OR1D5P58170 312 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 C1orf189Q5VU69 101 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 TMEM151BQ8IW70 566 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 ZNF511Q8NB15 262 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 OR2T35Q8NGX2 323 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 ZNF426Q9BUY5 554 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 NXF5Q9H1B4 397 aaKnown RBP11.99□□□□□ -0.49
CTNS-201ENST00000046640 METTL17Q9H7H0 456 aaPredicted RBP11.99□□□□□ -0.49
CTNS-201ENST00000046640 PDE7BQ9NP56 450 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 SPATA2Q9UM82 520 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 MUC3AQ02505 3323 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 GMDSO60547 372 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 NSA2O95478 260 aaKnown RBP11.99□□□□□ -0.49
CTNS-201ENST00000046640 RAF1P04049 648 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 NUDT1P36639 197 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 SELENOPP49908 381 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 EXOSC2Q13868 293 aaKnown RBP11.99□□□□□ -0.49
CTNS-201ENST00000046640 ANGPT1Q15389 498 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 VWA2Q5GFL6 755 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.99□□□□□ -0.49
CTNS-201ENST00000046640 PXDC1Q5TGL8 231 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 SYT13Q7L8C5 426 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 ZNF550Q7Z398 422 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 COMMD7Q86VX2 200 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 LSMEM1Q8N8F7 131 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 ZNF615Q8N8J6 731 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 C3orf49Q96BT1 292 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 Q96M85 177 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 MOGAT1Q96PD6 335 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 ELF4Q99607 663 aaPredicted RBP11.99□□□□□ -0.49
CTNS-201ENST00000046640 G6PC3Q9BUM1 346 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 RTN4RQ9BZR6 473 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 RANBP3Q9H6Z4 567 aaPredicted RBP11.99□□□□□ -0.49
CTNS-201ENST00000046640 B3GNT2Q9NY97 397 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 CHRNA9Q9UGM1 479 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 COPS3Q9UNS2 423 aa11.99□□□□□ -0.49
CTNS-201ENST00000046640 ELOA3DA6NLF2 546 aaPredicted RBP11.98□□□□□ -0.49
CTNS-201ENST00000046640 TMEM150CB9EJG8 249 aa11.98□□□□□ -0.49
CTNS-201ENST00000046640 GPR171O14626 319 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms