RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 RttnQ8R4Y8 2226 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ndufaf5A2APY7 343 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn2r66K7N6R9 851 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Srsf5O35326 269 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 H2-T23P06339 357 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Sgk494Q5SYL1 278 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1283Q7TQY4 305 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Adamts4Q8BNJ2 833 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ccdc58Q8R3Q6 144 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr361Q8VF16 322 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tctex1d2Q9CQ66 144 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Nrip3Q9JJR9 240 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ptf1aQ9QX98 324 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Spo11Q9WTK8 396 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pmm2Q9Z2M7 242 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r124D3YTX4 307 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1360K9J6X0 313 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r86L7N213 316 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pou3f1P21952 449 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 CryabP23927 175 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pou3f2P31360 445 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cntnap5bQ0V8T8 1292 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mmp7Q10738 264 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1359Q7TQU5 313 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cnot2Q8C5L3 540 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Kcnip2Q9JJ69 270 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Urb1Q571H0 2274 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 HccsP53702 272 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 SlbpP97440 275 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fbxw16Q497Z0 464 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp324Q78F42 583 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr774Q7TRI5 312 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Eif4e2Q8BMB3 245 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pdzk1ip1Q9CQH0 114 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rnf225Q9D7D1 332 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Srpk3Q9Z0G2 565 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ttll2A4Q9E4 540 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr117L7N1Z1 317 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 SncaO55042 140 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 F2rl3O88634 396 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm1587Q3UT80 123 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Smim12Q78RX3 92 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1500Q7TQQ3 311 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tgm4Q8BZH1 670 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr130Q8VFC1 317 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 MrgprhQ99MT8 321 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Q9D9C7 252 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Acss2Q9QXG4 701 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr601A2RS33 314 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Skint2A7XUX6 400 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Aadacl2B2RWD2 401 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn2r80E9Q1L0 863 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp995E9Q6M3 437 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 ComtO88587 265 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mas1P30554 324 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm525Q3V3I5 90 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp157Q6PCM4 567 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Itpk1Q8BYN3 419 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Calhm5Q8R100 309 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mtmr14Q8VEL2 648 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Adamdec1Q9R0X2 467 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gdf2Q9WV56 428 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 RfxankQ9Z205 269 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 TyrP11344 533 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Atp1b1P14094 304 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 AhrP30561 848 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Galnt14Q8BVG5 550 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 AllcQ9JHX6 414 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 SrrQ9QZX7 339 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm364A2AFI6 671 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Aff2O55112 1272 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 CfpP11680 464 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rab11aP62492 216 aaKnown RBP11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mettl7a1Q8C6B0 244 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cdc34Q8CFI2 235 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r226Q8R2A8 298 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 CthQ8VCN5 398 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Dmbx1Q91ZK4 381 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ndufaf4Q9D1H6 173 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ttc3O88196 1979 aaKnown RBP11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1555-ps1A0A140LHT7 321 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 RnlsA7RDN6 342 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm10719E9Q7T3 227 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm20671F6TVX7 576 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Hoxb5P09079 269 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rhox5P52651 210 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zadh2Q8BGC4 377 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Plekho2Q8K124 495 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr860Q8VFF7 317 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr937Q9EQB4 311 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Col5a2Q3U962 1497 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1315-ps1A0A140LI66 314 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Nlrp12E9Q5R7 1054 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Adcyap1r1P70205 496 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pdss2Q33DR3 401 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Eif4e1bQ3UTA9 244 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Taar8bQ5QD06 344 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Slc31a1Q8K211 196 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Naa40Q8VE10 237 aa11.19□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1316Q8VG12 314 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 370.6 ms