RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Sfxn2Q925N2 322 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gtf3c1Q8K284 2101 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr1436A0PK57 315 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Bpifa2P07743 235 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Laptm4aQ60961 233 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Fate1Q8CEK7 99 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr419E9Q0Y7 313 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rims3Q80U57 307 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cldnd1Q9CQX5 253 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Xylt2Q9EPL0 865 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Vmn2r8L7N472 848 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 GzmkO35205 263 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lancl1O89112 399 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 NppaP05125 152 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 P06321 130 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Il11ra2P70225 432 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Slc22a29Q8BWG6 551 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Alkbh4Q9D8F1 300 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Dclre1aQ9JIC3 1026 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Acox1Q9R0H0 661 aaKnown RBP15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gm5678A0A1B0GRG8 277 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Acp2P24638 423 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Psg28Q4KL66 472 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Prickle2Q80Y24 845 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Crb3Q8QZT4 113 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 VapaQ9WV55 249 aaKnown RBP15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Tex30Q3TUU5 225 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 B3gnt3Q5JCS9 372 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 P4htmQ8BG58 503 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 PsenenQ9CQR7 101 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cpxm1Q9Z100 722 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 ComtO88587 265 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Il6raP22272 460 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 InipQ3TXT3 104 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr1212Q7TR08 311 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gstm7Q80W21 218 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gpr20Q8BYC4 358 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr729Q8VET4 323 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Stpg4Q9DAG5 247 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 FurinP23188 793 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Sdc3Q64519 442 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Pinx1Q9CZX5 332 aaKnown RBP15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Kcnk5Q9JK62 502 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr71Q9QZ18 312 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Kcnj1O88335 372 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cntnap5bQ0V8T8 1292 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Fam173aQ501J2 229 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Casd1Q7TN73 797 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Il17fQ7TNI7 161 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cept1Q8BGS7 416 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Samt4Q9D4X6 233 aa15.56■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Slc30a3P97441 388 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Enpp3Q6DYE8 874 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Zfp819Q80V81 607 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Chst2Q80WV3 530 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Csnk1a1Q8BK63 337 aaKnown RBP15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Spem2Q8C5U4 503 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Wdr54Q9R0D8 334 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ppp1r17Q9Z2E4 159 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 F3P20352 294 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Acot8P58137 320 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Abhd11Q8K4F5 307 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Slco2a1Q9EPT5 643 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 ClcnkbQ9WUB6 687 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rab6aP35279 208 aaKnown RBP15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Riiad1Q3KNY5 119 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 4930438A08RikQ5SPH3 536 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Vmn1r22Q8R2D1 302 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Mfsd6lQ8R3N2 586 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Recql5Q8VID5 982 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Mrgpra8Q91ZC4 305 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Arpc5Q9CPW4 151 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gal3st1Q9JHE4 423 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rhox1B1APN4 224 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Alox5apP30355 161 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lhx3P50481 400 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Igsf5Q7TSN7 370 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cpne6Q9Z140 557 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Vmn2r28L7N203 852 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 NnmtO55239 264 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Pou2f1P25425 770 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ackr3P56485 362 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gabrb3P63080 473 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Zbtb49Q8BXX2 756 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Tgm4Q8BZH1 670 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Q8C3W1 322 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Osgin1Q8VC10 478 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Hrasls5Q9CPX5 270 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cacng4Q9JJV4 327 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ccdc9bA3KGF9 545 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Esp18A8R0V1 91 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gm20715E9Q3L7 95 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Fignl2J3QK54 644 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gm3336J3QMQ6 198 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 H2-K1P01901 369 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 GbaP17439 515 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Doc2bP70169 412 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Slc27a5Q4LDG0 689 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Apex2Q68G58 516 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr1133Q7TR44 313 aa15.55■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms