RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 KIRREL2Q6UWL6 708 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 AHSA2Q719I0 299 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 ZNF367Q7RTV3 350 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 ATG4DQ86TL0 474 aaPredicted RBP15.6■□□□□ 0.09
PHGDH-234ENST00000642041 GRHL3Q8TE85 626 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 SGCZQ96LD1 299 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 IL4I1Q96RQ9 567 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 PTGES2Q9H7Z7 377 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 ZBTB20Q9HC78 741 aaPredicted RBP15.6■□□□□ 0.09
PHGDH-234ENST00000642041 ACOT13Q9NPJ3 140 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 INPP5EQ9NRR6 644 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 CNIH4Q9P003 139 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 WARS2Q9UGM6 360 aaKnown RBP15.6■□□□□ 0.09
PHGDH-234ENST00000642041 TCFL5Q9UL49 500 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 CARD8Q9Y2G2 431 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 EXOSC1Q9Y3B2 195 aaKnown RBP15.6■□□□□ 0.09
PHGDH-234ENST00000642041 A0A1B0GUH1 482 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 SLC22A31A6NKX4 558 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 KDM4EB2RXH2 506 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-234ENST00000642041 SURF4O15260 269 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 OR7A10O76100 309 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 UMODP07911 640 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 ZNF3P17036 446 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 FUT1P19526 365 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 EIF1P41567 113 aaKnown RBP15.59■□□□□ 0.09
PHGDH-234ENST00000642041 CENPAP49450 140 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 CLK1P49759 484 aaKnown RBP15.59■□□□□ 0.09
PHGDH-234ENST00000642041 EFNA3P52797 238 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.59■□□□□ 0.095e-8■■■□□ 19.2
PHGDH-234ENST00000642041 GTF2IRD2BQ6EKJ0 949 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 XAF1Q6GPH4 301 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 LINC00299Q6ZSB3 139 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 GTF2IRD2Q86UP8 949 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 ANKRD13BQ86YJ7 626 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 CLVS1Q8IUQ0 354 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-234ENST00000642041 CCDC103Q8IW40 242 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 PSD4Q8NDX1 1056 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 ANKK1Q8NFD2 765 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 PROKR2Q8NFJ6 384 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 OR9Q1Q8NGQ5 310 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 HGDQ93099 445 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 LRR1Q96L50 414 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 GPX7Q96SL4 187 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-234ENST00000642041 PRR14Q9BWN1 585 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 MND1Q9BWT6 205 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 UBQLN3Q9H347 655 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 CXorf56Q9H5V9 222 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 FKRPQ9H9S5 495 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 FGF20Q9NP95 211 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-234ENST00000642041 CHST11Q9NPF2 352 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 ISYNA1Q9NPH2 558 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 CMC2Q9NRP2 79 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 SERINC1Q9NRX5 453 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 TAS2R10Q9NYW0 307 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 ERVK-18Q9QC07 812 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 ZNF229Q9UJW7 825 aa15.59■□□□□ 0.09
PHGDH-234ENST00000642041 DIMT1Q9UNQ2 313 aaKnown RBP15.59■□□□□ 0.09
PHGDH-234ENST00000642041 A0A087WZY1 265 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 ZNF208O43345 1280 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 RAB36O95755 333 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 NUDT14O95848 222 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 COX6B1P14854 86 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 ADH6P28332 368 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 GPR4P46093 362 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 MTNR1AP48039 350 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 CCR4P51679 360 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 FOXD4Q12950 439 aaPredicted RBP15.58■□□□□ 0.08
PHGDH-234ENST00000642041 CNPY1Q3B7I2 92 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 SYT14P1Q58G82 188 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 TMEM236Q5W0B7 351 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 ACSM5Q6NUN0 579 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 IGFL3Q6UXB1 125 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 GDPGP1Q6ZNW5 385 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 Q6ZPB1 254 aaPredicted RBP15.58■□□□□ 0.08
PHGDH-234ENST00000642041 KIF18BQ86Y91 864 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 SPACA9Q96E40 222 aaPredicted RBP15.58■□□□□ 0.08
PHGDH-234ENST00000642041 GPA33Q99795 319 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 JAM3Q9BX67 310 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 MEPEQ9NQ76 525 aaPredicted RBP15.58■□□□□ 0.08
PHGDH-234ENST00000642041 NANSQ9NR45 359 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 SEC14L4Q9UDX3 406 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 TEKT2Q9UIF3 430 aa15.58■□□□□ 0.08
PHGDH-234ENST00000642041 TRAV36DV7A0A075B6V5 113 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 ANKRD33BA6NCL7 494 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 A8MVM7 634 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 H3BSA7 217 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 ETV2O00321 342 aaPredicted RBP15.57■□□□□ 0.08
PHGDH-234ENST00000642041 SLC22A1O15245 554 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 ENTPD6O75354 484 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 STSP08842 583 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 DBTP11182 482 aaKnown RBP15.57■□□□□ 0.08
PHGDH-234ENST00000642041 COX6A1P12074 109 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 NOS3P29474 1203 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 GSTT1P30711 240 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 HTR1FP30939 366 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 RRADP55042 308 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 PLAURQ03405 335 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 ZNF117Q03924 483 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 IRF3Q14653 427 aa15.57■□□□□ 0.08
PHGDH-234ENST00000642041 CD226Q15762 336 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms