RNA–Protein interactions for RNA: ENST00000641425.1

CASC19-231, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 1,156 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-231	ENST00000641425	PRF1	P14222	555 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	COX6B1	P14854	86 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	IL7R	P16871	459 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	PSMA4	P25789	261 aa	Known RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CHRNB4	P30926	498 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	SFTPD	P35247	375 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	PTGER4	P35408	488 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	SLC6A8	P48029	635 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	IDH2	P48735	452 aa	Known RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	MRPL19	P49406	292 aa	Known RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	KHK	P50053	298 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CCR4	P51679	360 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	ZNF41	P51814	821 aa	Predicted RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CARD18	P57730	90 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	EEFSEC	P57772	596 aa	Known RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	DSTN	P60981	165 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	SIRPA	P78324	504 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	MXRA7	P84157	204 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	HOXC5	Q00444	222 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	LRRC74A	Q0VAA2	488 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	FOXF1	Q12946	379 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CBFB	Q13951	182 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	SELPLG	Q14242	412 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	FGFBP1	Q14512	234 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	GANAB	Q14697	944 aa	Known RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	PON3	Q15166	354 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.1	□□□□□ -1.75	8e-7	■■■■□ 23.2
CASC19-231	ENST00000641425	HSPB2	Q16082	182 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	BCL2A1	Q16548	175 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	PLPPR5	Q32ZL2	321 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	TOR2A	Q5JU69	321 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	RIPPLY2	Q5TAB7	128 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	MEX3B	Q6ZN04	569 aa	Known RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	EIF3M	Q7L2H7	374 aa	Known RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	GRAMD2A	Q8IUY3	354 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	LACC1	Q8IV20	430 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	PQLC1	Q8N2U9	271 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CLIP4	Q8N3C7	705 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CNEP1R1	Q8N9A8	125 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	ZNF527	Q8NB42	609 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	OR52P1P	Q8NH57	321 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	OR5W2	Q8NH69	310 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	NFKBID	Q8NI38	313 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	ZNF563	Q8TA94	476 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	LINC01560	Q8TB33	94 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	STARD4	Q96DR4	205 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	TMEM19	Q96HH6	336 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	TRNT1	Q96Q11	434 aa	Known RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	MRI1	Q9BV20	369 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	PRRG4	Q9BZD6	226 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	NMUR2	Q9GZQ4	415 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	ZNF350	Q9GZX5	532 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	SLC38A1	Q9H2H9	487 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	IKZF5	Q9H5V7	419 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	ZNF385D	Q9H6B1	395 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CHST11	Q9NPF2	352 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	MED4	Q9NPJ6	270 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	SAR1A	Q9NR31	198 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CTPS2	Q9NRF8	586 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	RLIM	Q9NVW2	624 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	LEF1	Q9UJU2	399 aa	Predicted RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	CLEC4A	Q9UMR7	237 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	LIPT1	Q9Y234	373 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	NDUFAF1	Q9Y375	327 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	AP4B1	Q9Y6B7	739 aa		4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	UBR5	O95071	2799 aa	Predicted RBP	4.1	□□□□□ -1.75
CASC19-231	ENST00000641425	UTP20	O75691	2785 aa	Known RBP	4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	PRRC2A	P48634	2157 aa	Known RBP	4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	CAD	P27708	2225 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425		A0A087WZY1	265 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425		A0A0G2JPF8	293 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	TMEM72	A0PK05	275 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	MBD3L3	A6NE82	208 aa	Predicted RBP	4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	AGAP5	A6NIR3	686 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	SLC22A20	A6NK97	555 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	HNRNPCL2	B2RXH8	293 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	HNRNPCL3	B7ZW38	293 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425		M0QX08	132 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	SYT5	O00445	386 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	AP3D1	O14617	1153 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	ADAMDEC1	O15204	470 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	FRS3	O43559	492 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	KIAA0513	O60268	411 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	TPST1	O60507	370 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	HNRNPCL1	O60812	293 aa	Known RBP	4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	AQP8	O94778	261 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	PRSS23	O95084	383 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	PGM3	O95394	542 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	BCHE	P06276	602 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	DBI	P07108	87 aa	Known RBP	4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	GUSB	P08236	651 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	HNRNPCL4	P0DMR1	293 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	RAP2A	P10114	183 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	TFPI	P10646	304 aa		4.09	□□□□□ -1.75
CASC19-231	ENST00000641425	UBL4A	P11441	157 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms