RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 NOSIPQ9Y314 301 aaKnown RBP23.63■■□□□ 1.37
VEGFA-231ENST00000640499 TESMINQ9Y4I5 508 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 GPR171O14626 319 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 OR2T1O43869 369 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 ZNF682O95780 498 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 TCN1P20061 433 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-231ENST00000640499 CBLP22681 906 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 GRPRP30550 384 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 TSC22D1Q15714 1073 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 CXorf67Q86X51 503 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-231ENST00000640499 EPHX4Q8IUS5 362 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 NKAIN4Q8IVV8 208 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 DACH2Q96NX9 599 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 SF3B5Q9BWJ5 86 aaKnown RBP23.62■■□□□ 1.37
VEGFA-231ENST00000640499 KLHL4Q9C0H6 718 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 MCCC2Q9HCC0 563 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 RIMS3Q9UJD0 308 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 PRR14LQ5THK1 2151 aa23.62■■□□□ 1.37
VEGFA-231ENST00000640499 HRNRQ86YZ3 2850 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-231ENST00000640499 PDZD2O15018 2839 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 SH3D21A4FU49 640 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 M0R082 166 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 ADAP00813 363 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 SAMD4BQ5PRF9 694 aaKnown RBP23.61■■□□□ 1.37
VEGFA-231ENST00000640499 CREB3L2Q70SY1 520 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 STK32CQ86UX6 486 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 FAM86B1Q8N7N1 296 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 ZNF417Q8TAU3 575 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 FAM162AQ96A26 154 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 HSH2DQ96JZ2 352 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 ZNF587Q96SQ5 575 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-231ENST00000640499 NAV2Q8IVL1 2488 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 LRBAP50851 2863 aa23.61■■□□□ 1.37
VEGFA-231ENST00000640499 MS4A18H0YCH9 400 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 FFAR1O14842 300 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 CTAG2O75638 210 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 OR5F1O95221 314 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 IGHV3-9P01782 118 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 THBDP07204 575 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 PSMB1P20618 241 aaKnown RBP23.6■■□□□ 1.37
VEGFA-231ENST00000640499 YAP1P46937 504 aaKnown RBP23.6■■□□□ 1.37
VEGFA-231ENST00000640499 MS4A18Q3C1V0 323 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 TMEM225Q6GV28 225 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 C16orf89Q6UX73 402 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 NHLRC1Q6VVB1 395 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 GPAT4Q86UL3 456 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 LZICQ8WZA0 190 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 MPP4Q96JB8 637 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 GORASP2Q9H8Y8 452 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 MEPEQ9NQ76 525 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-231ENST00000640499 DCAF13Q9NV06 445 aaKnown RBP23.6■■□□□ 1.37
VEGFA-231ENST00000640499 MAST4O15021 2626 aa23.6■■□□□ 1.37
VEGFA-231ENST00000640499 J3KTA2 159 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 HPRP00739 348 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 MNAT1P51948 309 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 FOXG1P55316 489 aaPredicted RBP23.59■■□□□ 1.37
VEGFA-231ENST00000640499 TAS2R41P59536 307 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 MXRA7P84157 204 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 POU4F3Q15319 338 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 SFRP5Q5T4F7 317 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 Q6ZT83 130 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 ZNF100Q8IYN0 542 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 TMEM45BQ96B21 275 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 EPYCQ99645 322 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 POLR2J2Q9GZM3 115 aaKnown RBP23.59■■□□□ 1.37
VEGFA-231ENST00000640499 POLR2J3Q9H1A7 115 aaKnown RBP23.59■■□□□ 1.37
VEGFA-231ENST00000640499 RASD1Q9Y272 281 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 GPR52Q9Y2T5 361 aa23.59■■□□□ 1.37
VEGFA-231ENST00000640499 TEX15Q9BXT5 2789 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 A6NNC1 897 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 SIAH2O43255 324 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 MRPL33O75394 65 aaKnown RBP23.58■■□□□ 1.37
VEGFA-231ENST00000640499 PRSS23O95084 383 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 VAMP5O95183 116 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 CALB2P22676 271 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 IGHV1-2P23083 117 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 UGT2B15P54855 530 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 LSM11P83369 360 aaKnown RBP eCLIP23.58■■□□□ 1.372e-28■□□□□ 11.1
VEGFA-231ENST00000640499 IFI44LQ53G44 452 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 TTC33Q6PID6 262 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-231ENST00000640499 H1FNTQ75WM6 255 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-231ENST00000640499 TRPM8Q7Z2W7 1104 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 TMEM255BQ8WV15 326 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 APH1AQ96BI3 265 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 MAN2C1Q9NTJ4 1040 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 NDE1Q9NXR1 346 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 NDRG3Q9UGV2 375 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 B3GALT5Q9Y2C3 310 aa23.58■■□□□ 1.37
VEGFA-231ENST00000640499 CSMD2Q7Z408 3487 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 P2RY6Q15077 328 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 ZNF74Q16587 644 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 FBXW9Q5XUX1 488 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 LRRC17Q8N6Y2 441 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 GEMIN6Q8WXD5 167 aaKnown RBP23.57■■□□□ 1.36
VEGFA-231ENST00000640499 PRRC1Q96M27 445 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 OXGR1Q96P68 337 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 RASSF1Q9NS23 344 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 TAS2R1Q9NYW7 299 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 RHCGQ9UBD6 479 aa23.57■■□□□ 1.36
VEGFA-231ENST00000640499 LOC102725191A0A1B0GVB3 256 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms