RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 CA13Q8N1Q1 262 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 OR1N1Q8NGS0 311 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 PIGCQ92535 297 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 PHYHIPQ92561 330 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 TMEM68Q96MH6 324 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 ALG12Q9BV10 488 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 FUNDC2Q9BWH2 189 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 OR51B4Q9Y5P0 310 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 ARAP2Q8WZ64 1704 aa10.19□□□□□ -0.78
SCN1B-208ENST00000640135 TRAV17A0A0B4J275 112 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 RAD1O60671 282 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ADAM23O75077 832 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 SERPINE2P07093 398 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 NUDT7P0C024 238 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ZGLP1P0C6A0 271 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 BMP1P13497 986 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 SELEP16581 610 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ETV6P41212 452 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 LSAMPQ13449 338 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 KCNAB1Q14722 419 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 MEF2DQ14814 521 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 TBC1D28Q2M2D7 210 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 MARCH3Q86UD3 253 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 LMF1Q96S06 567 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 NUDT22Q9BRQ3 303 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 WDR76Q9H967 626 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ZNF281Q9Y2X9 895 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 LOXHD1Q8IVV2 1947 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 EVPLQ92817 2033 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 A0A1W2PR48 441 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 TOX3O15405 576 aaPredicted RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 TNFSF14O43557 240 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ALDOBP05062 364 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 T-ENOLP0DO92 83 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 CD40LGP29965 261 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 GRB2P62993 217 aaKnown RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 FOXC1Q12948 553 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ZNF628Q5EBL2 1059 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ZNF585AQ6P3V2 769 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 OR2A1Q8NGT9 310 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 CCL4L1Q8NHW4 92 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 FAIMQ9NVQ4 179 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 G3V3Y1 287 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 AMY2AP04746 511 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 EPHA8P29322 1005 aaPredicted RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 PIGFQ07326 219 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 MLLT11Q13015 90 aaPredicted RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 IHHQ14623 411 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 OR7E24Q6IFN5 339 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 NDUFAF7Q7L592 441 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 SIRT6Q8N6T7 355 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 EXD3Q8N9H8 876 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 POGLUT1Q8NBL1 392 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 PSMF1Q92530 271 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 LRFN5Q96NI6 719 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 TNFRSF13CQ96RJ3 184 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 CACNG6Q9BXT2 260 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 APMAPQ9HDC9 416 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 MTCH2Q9Y6C9 303 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 KNL1Q8NG31 2342 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 A0A087WUU8 490 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 PRAMEF27A3QJZ7 478 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 C4orf47A7E2U8 309 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ZNF593O00488 134 aaPredicted RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 NARSO43776 548 aaKnown RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 DBHP09172 617 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 KIR2DL3P43628 341 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 CCL7P80098 99 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 TBCEQ15813 527 aaPredicted RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 NTRK2Q16620 822 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 NXNL2Q5VZ03 156 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 GSG1LQ6UXU4 331 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 PTRH1Q86Y79 214 aaKnown RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 DNAJC22Q8N4W6 341 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 TP53I13Q8NBR0 393 aaPredicted RBP10.18□□□□□ -0.78
SCN1B-208ENST00000640135 C4orf36Q96KX1 117 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 PHOX2BQ99453 314 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 SLC23A2Q9UGH3 650 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 NDRG3Q9UGV2 375 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 ENPP5Q9UJA9 477 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 PCDHGA3Q9Y5H0 932 aa10.18□□□□□ -0.78
SCN1B-208ENST00000640135 IGHV1OR15-9A0A0B4J2B8 117 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 FZD7O75084 574 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 FCER2P06734 321 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 RAB40ALP0C0E4 278 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 ITGB8P26012 769 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 NXPH1P58417 271 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 GABREP78334 506 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 DEFB109BQ30KR1 87 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 SAXO2Q658L1 398 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 TMEM207Q6UWW9 146 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 CYHR1Q6ZMK1 362 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 RETREG3Q86VR2 466 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 SGPP2Q8IWX5 399 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 FAM217AQ8IXS0 508 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 SMRP1Q8NCR6 262 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 NPRL2Q8WTW4 380 aa10.17□□□□□ -0.78
SCN1B-208ENST00000640135 RAB40AQ8WXH6 277 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms