RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 ZNF716A6NP11 495 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 IL2RAP01589 272 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 ASAH2BP0C7U1 165 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 GTF2E2P29084 291 aaKnown RBP17.31■□□□□ 0.36
HLA-A-209ENST00000638375 OMPP47874 163 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 FOXF2Q12947 444 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 LAPTM4AQ15012 233 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 GUSBP1Q15486 140 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 MAMDC2Q7Z304 686 aaPredicted RBP17.31■□□□□ 0.36
HLA-A-209ENST00000638375 TMEM179BQ7Z7N9 219 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 SLC43A2Q8N370 569 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 LIPHQ8WWY8 451 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 INTS12Q96CB8 462 aaKnown RBP17.31■□□□□ 0.36
HLA-A-209ENST00000638375 PSD2Q9BQI7 771 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 ASPNQ9BXN1 380 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 NTN4Q9HB63 628 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 CHST11Q9NPF2 352 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 NANSQ9NR45 359 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 MRPL39Q9NYK5 338 aaKnown RBP17.31■□□□□ 0.36
HLA-A-209ENST00000638375 ZNF229Q9UJW7 825 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 TMCC3Q9ULS5 477 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 CLEC4AQ9UMR7 237 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 CORINQ9Y5Q5 1042 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 PHF3Q92576 2039 aaKnown RBP17.31■□□□□ 0.36
HLA-A-209ENST00000638375 ARHGAP21Q5T5U3 1957 aa17.31■□□□□ 0.36
HLA-A-209ENST00000638375 HIVEP3Q5T1R4 2406 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 GNGT2O14610 69 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 CLOCKO15516 846 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 HNRNPRO43390 633 aaKnown RBP17.3■□□□□ 0.36
HLA-A-209ENST00000638375 FUT1P19526 365 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 GPR4P46093 362 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 RASGEF1BQ0VAM2 473 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 ATP6AP1Q15904 470 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 OR2A2Q6IF42 318 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 ZFP1Q6P2D0 407 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 H1FNTQ75WM6 255 aaPredicted RBP17.3■□□□□ 0.36
HLA-A-209ENST00000638375 RRM2BQ7LG56 351 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 ZER1Q7Z7L7 766 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 SCAIQ8N9R8 606 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 ADPRHL1Q8NDY3 354 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 OR5J2Q8NH18 312 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 PIGXQ8TBF5 258 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 LRTOMTQ8WZ04 291 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 RND1Q92730 232 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 FAM46AQ96IP4 442 aaKnown RBP17.3■□□□□ 0.36
HLA-A-209ENST00000638375 GPA33Q99795 319 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 C6orf203Q9P0P8 240 aaPredicted RBP17.3■□□□□ 0.36
HLA-A-209ENST00000638375 B3GALT5Q9Y2C3 310 aa17.3■□□□□ 0.36
HLA-A-209ENST00000638375 DOCK7Q96N67 2140 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 HTR3EA5X5Y0 456 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 CDC42EP2O14613 210 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 OR10H3O60404 316 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 SS18L1O75177 396 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-209ENST00000638375 DEAF1O75398 565 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-209ENST00000638375 HPRP00739 348 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 TMIGD3P0DMS9 266 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-209ENST00000638375 SLC16A1P53985 500 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 PER3P56645 1201 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 SRSF1Q07955 248 aaKnown RBP eCLIP17.29■□□□□ 0.36
HLA-A-209ENST00000638375 GK3PQ14409 553 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 PDK3Q15120 406 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 RNPS1Q15287 305 aaKnown RBP17.29■□□□□ 0.36
HLA-A-209ENST00000638375 ZNF770Q6IQ21 691 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-209ENST00000638375 HMBOX1Q6NT76 420 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 TMPRSS11FQ6ZWK6 438 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 CCDC71Q8IV32 467 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-209ENST00000638375 MCEMP1Q8IX19 187 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 KDM8Q8N371 416 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 OR9Q2Q8NGE9 314 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 GMPPAQ96IJ6 420 aaPredicted RBP17.29■□□□□ 0.36
HLA-A-209ENST00000638375 ZFP3Q96NJ6 502 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 BCO1Q9HAY6 547 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 S100A14Q9HCY8 104 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 KLHL9Q9P2J3 617 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 B3GAT1Q9P2W7 334 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 RNF6Q9Y252 685 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 TMEM5Q9Y2B1 443 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 MYO7BQ6PIF6 2116 aa17.29■□□□□ 0.36
HLA-A-209ENST00000638375 IGKV3D-15A0A087WSY6 115 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 A0A1W2PNV4 684 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 HSPB2A8KAH6 182 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 EFCAB9A8MZ26 197 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 MS4A18H0YCH9 400 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 PLPP3O14495 311 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 KLF4O43474 513 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 CCNB2O95067 398 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 LDLRP01130 860 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 FCGR1AP12314 374 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 FASP25445 335 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 DNAJA1P31689 397 aaKnown RBP17.28■□□□□ 0.36
HLA-A-209ENST00000638375 PMS2P3Q13401 168 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 SLC17A1Q14916 467 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 HSPB2Q16082 182 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 MICAQ29983 383 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 MS4A18Q3C1V0 323 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 GTF2IRD2BQ6EKJ0 949 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 PGBD2Q6P3X8 592 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 MTFR2Q6P444 385 aa17.28■□□□□ 0.36
HLA-A-209ENST00000638375 ZNF771Q7L3S4 317 aaPredicted RBP17.28■□□□□ 0.36
HLA-A-209ENST00000638375 NANOGNBQ7Z5D8 188 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms