RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 KRT33AO76009 404 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 IGKV3-15P01624 115 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 TACSTD2P09758 323 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 ALDOCP09972 364 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 PRG2P13727 222 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 UQCRBP14927 111 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 LBPP18428 481 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 PAX7P23759 505 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 CXCR1P25024 350 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 S100A3P33764 101 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 MVDP53602 400 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 UBE2NP61088 152 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 UFM1P61960 85 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 TXNL4AP83876 142 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 GNA13Q14344 377 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 CHI3L2Q15782 390 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 TMEM225Q6GV28 225 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 OGFOD2Q6N063 350 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 VHLLQ6RSH7 139 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 VRK2Q86Y07 508 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF440Q8IYI8 595 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 NUP37Q8NFH4 326 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 DOK1Q99704 481 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 KCNS3Q9BQ31 491 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 NUF2Q9BZD4 464 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 LINC00470Q9BZP3 86 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 ROPN1BQ9BZX4 212 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 ROPN1Q9HAT0 212 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 ADPRHL2Q9NX46 363 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 PRDM4Q9UKN5 801 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 RAP2CQ9Y3L5 183 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 CHST2Q9Y4C5 530 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 TMEM129A0AVI4 362 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF503-AS2A6NEH8 195 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 OR6C65A6NJZ3 312 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 A8MVM7 634 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 TMEM229AB2RXF0 380 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 FTCDNL1E5RQL4 147 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 LILRA1O75019 489 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF432O94892 652 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 VAMP5O95183 116 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 GSNP06396 782 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 CELA3BP08861 270 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 TFPTP0C1Z6 253 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 NR2F1P10589 423 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 DAOP14920 347 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 THBS4P35443 961 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 RPL14P50914 215 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 NME5P56597 212 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 IFFO1Q0D2I5 559 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 LIN52Q52LA3 116 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 C1orf140Q5VVS0 124 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 LIPNQ5VXI9 398 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 WBP2NLQ6ICG8 309 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 NIPAL3Q6P499 406 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF836Q6ZNA1 936 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 PEX5LQ8IYB4 626 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 ZCCHC24Q8N2G6 241 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 CADM2Q8N3J6 435 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 TRIML2Q8N7C3 387 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 OR4F15Q8NGB8 312 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 PNPT1Q8TCS8 783 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 HPS1Q92902 700 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 PANX1Q96RD7 426 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 PTDSS2Q9BVG9 487 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 TAPBPLQ9BX59 468 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 RAB1BQ9H0U4 201 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF442Q9H7R0 627 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 MEAF6Q9HAF1 191 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 SLC6A13Q9NSD5 602 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 AIG1Q9NVV5 245 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 RASD1Q9Y272 281 aa10.51□□□□□ -0.73
CACNA1A-250ENST00000637809 RPL36A-HNRNPH2H7BZ11 118 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 hCG_2039718K7EN88 272 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 BIRC5O15392 142 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 FZD7O75084 574 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 CBR1P16152 277 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 APEX1P27695 318 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 SLC1A6P48664 564 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 ANXA11P50995 505 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 VSNL1P62760 191 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 ROR2Q01974 943 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 RIN1Q13671 783 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 RNF220Q5VTB9 566 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 PRAMEF8Q5VWM4 474 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 PRAMEF7Q5VXH5 474 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF621Q6ZSS3 439 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 KDM8Q8N371 416 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF786Q8N393 782 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 CLIP4Q8N3C7 705 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 SVOPLQ8N434 492 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 RFLNBQ8N5W9 214 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 ANKK1Q8NFD2 765 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 OR52P1PQ8NH57 321 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 NEU4Q8WWR8 484 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF837Q96EG3 531 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 OR52E6Q96RD3 313 aa10.5□□□□□ -0.73
CACNA1A-250ENST00000637809 TMEM109Q9BVC6 243 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms