RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SMOC1Q9H4F8 434 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 CHMP1AQ9HD42 196 aaPredicted RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 Q9N2J8 555 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 U3KQA8 63 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 ARHGEF9O43307 516 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 AK1P00568 194 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 CKMT1AP12532 417 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 RPS2P15880 293 aaKnown RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 FBLP22087 321 aaKnown RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 SIGLEC14Q08ET2 396 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 FUT7Q11130 342 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 C12orf73Q69YU5 71 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 KANSL1Q7Z3B3 1105 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 TIGD4Q8IY51 512 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 GATSQ8NAP1 163 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 PFN4Q8NHR9 129 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 WBP1Q96G27 269 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 CDCA4Q9BXL8 241 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 CDC14CA4D256 554 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 CDC42EP2O14613 210 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 QPRTQ15274 297 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 NR0B2Q15466 257 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 NSDHLQ15738 373 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 SNAPC1Q16533 368 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 DECR1Q16698 335 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 SLC30A6Q6NXT4 461 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 BCORP1Q8N888 145 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 OR4C6Q8NH72 309 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 KLHL15Q96M94 604 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 PRSS27Q9BQR3 290 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 MESP1Q9BRJ9 268 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 DPH1Q9BZG8 443 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 PPIL3Q9H2H8 161 aaKnown RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 EXOSC4Q9NPD3 245 aaKnown RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 PRMT8Q9NR22 394 aaPredicted RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 GLRX2Q9NS18 164 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 C20orf141Q9NUB4 165 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 CTSFQ9UBX1 484 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 CBLCQ9ULV8 474 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 SPTBN2O15020 2390 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 FER1L5A0AVI2 2057 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 A0A1W2PQL4 384 aaPredicted RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 TRAPPC13A5PLN9 417 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 CLPSP04118 112 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 APEX1P27695 318 aaKnown RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 GALNSP34059 522 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 IFNGR2P38484 337 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 PUDPQ08623 228 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 TSPAN31Q12999 210 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 RIN1Q13671 783 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 SERTAD2Q14140 314 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 AANATQ16613 207 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 KRBOX4Q5JUW0 171 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 TMEM71Q6P5X7 295 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 PRR22Q8IZ63 422 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 OR8H3Q8N146 312 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 LINC00471Q8N535 108 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 SLC38A9Q8NBW4 561 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 HOXB13Q92826 284 aaPredicted RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 GFM1Q96RP9 751 aaKnown RBP10.55□□□□□ -0.72
CLN6-217ENST00000636964 DUSP23Q9BVJ7 150 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 C1QTNF6Q9BXI9 259 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 FLRT3Q9NZU0 649 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 NLKQ9UBE8 527 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 SUSD2Q9UGT4 822 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 COPS3Q9UNS2 423 aa10.55□□□□□ -0.72
CLN6-217ENST00000636964 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 BLACEA4D250 179 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 APOL3O95236 402 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 TIAF1O95411 115 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 HOXA1P49639 335 aaPredicted RBP10.54□□□□□ -0.72
CLN6-217ENST00000636964 RRAS2P62070 204 aaPredicted RBP10.54□□□□□ -0.72
CLN6-217ENST00000636964 TEKQ02763 1124 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 P2RY14Q15391 338 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 FAM76BQ5HYJ3 339 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 XKRXQ6PP77 449 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 CD300LDQ6UXZ3 194 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 MBOAT2Q6ZWT7 520 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 ATP6V1C2Q8NEY4 427 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 OR6C1Q96RD1 312 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 GAL3ST4Q96RP7 486 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 TSSK6Q9BXA6 273 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 ZFP64Q9NPA5 681 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 IQCMA0A1B0GVH7 501 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 FABP7O15540 132 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 MPZL2O60487 215 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 GSTM3P21266 225 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 RORCP51449 518 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 CDK5Q00535 292 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 IKZF1Q13422 519 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 PAQR6Q6TCH4 344 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 PRSS42Q7Z5A4 293 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 KLHL36Q8N4N3 616 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 OR8J1Q8NGP2 316 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 ATOH1Q92858 354 aaPredicted RBP10.54□□□□□ -0.72
CLN6-217ENST00000636964 CRELD1Q96HD1 420 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 LRR1Q96L50 414 aa10.54□□□□□ -0.72
CLN6-217ENST00000636964 ZNF768Q9H5H4 540 aaKnown RBP10.54□□□□□ -0.72
CLN6-217ENST00000636964 IGHV3-20A0A0C4DH32 117 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms