RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 RAB33AQ14088 237 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 SPATA46Q5T0L3 261 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 CNIH2Q6PI25 160 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 FAM111BQ6SJ93 734 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 NT5C3BQ969T7 300 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 TUBB1Q9H4B7 451 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 ATP13A2Q9NQ11 1180 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 GOLT1BQ9Y3E0 138 aa16.59■□□□□ 0.25
CACNA1A-227ENST00000636549 H0Y8X5 98 aa16.58■□□□□ 0.25
CACNA1A-227ENST00000636549 OR8G3PP0DMU2 310 aa16.58■□□□□ 0.25
CACNA1A-227ENST00000636549 RPS16P62249 146 aaKnown RBP16.58■□□□□ 0.25
CACNA1A-227ENST00000636549 FADDQ13158 208 aa16.58■□□□□ 0.25
CACNA1A-227ENST00000636549 RPE65Q16518 533 aa16.58■□□□□ 0.25
CACNA1A-227ENST00000636549 ZNF384Q8TF68 577 aa16.58■□□□□ 0.25
CACNA1A-227ENST00000636549 SLC39A7Q92504 469 aa16.58■□□□□ 0.25
CACNA1A-227ENST00000636549 DEGS1O15121 323 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 AK1P00568 194 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 TK1P04183 234 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 SPEM2Q0P670 501 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 PARM1Q6UWI2 310 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 Q7L0L9 218 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 NAA40Q86UY6 237 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 OR10K1Q8NGX5 313 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 MITD1Q8WV92 249 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 TCTEX1D2Q8WW35 142 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 CPNE4Q96A23 557 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 EMC6Q9BV81 110 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 AMBRA1Q9C0C7 1298 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 BIN3Q9NQY0 253 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 P4HTMQ9NXG6 502 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 PHF1O43189 567 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 AKR7A3O95154 331 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 ITGB7P26010 798 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 PELI2Q9HAT8 420 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 MSTNO14793 375 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 ADAM12O43184 909 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 NSA2O95478 260 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 ACTBP60709 375 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 ACTG1P63261 375 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 MRPL2Q5T653 305 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 DBX2Q6ZNG2 339 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 UBR1Q8IWV7 1749 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 ACOD1A6NK06 481 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 HLA-DOBP13765 273 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 BCKDHBP21953 392 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 LTBQ06643 244 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 SHHQ15465 462 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 TMIEQ8NEW7 156 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 SLC6A20Q9NP91 592 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 GPR173Q9NS66 373 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 SRPK3Q9UPE1 567 aa16.58■□□□□ 0.24
CACNA1A-227ENST00000636549 ANTXRLA6NF34 631 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 CYB561P49447 251 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 DNAJB13P59910 316 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 MANEALQ5VSG8 457 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 OPN5Q6U736 354 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 ZNF705AQ6ZN79 300 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 CDRT4Q8N9R6 151 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 OR8J3Q8NGG0 315 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 PBX4Q9BYU1 374 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 ZNF337Q9Y3M9 751 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 KLRC4-KLRK1H3BQV0 150 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 SYPL1Q16563 259 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 SIMC1Q8NDZ2 872 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 OR10G3Q8NGC4 313 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 FAM213BQ8TBF2 198 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 FUBP1Q96AE4 644 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 FBXO17Q96EF6 278 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 RASAL1O95294 804 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 UTS2O95399 124 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 UBL7Q96S82 380 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 LMF2Q9BU23 707 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 SCML1Q9UN30 329 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 SDHDO14521 159 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 FANCGO15287 622 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 EEDO75530 441 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 SPINK2P20155 84 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 PRDX3P30048 256 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 ACKR1Q16570 336 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 ZNF322Q6U7Q0 402 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 SYT9Q86SS6 491 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 C20orf24Q9BUV8 137 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 SLC2A11Q9BYW1 496 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 IL26Q9NPH9 171 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 MROH6A6NGR9 719 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 HLA-AP01891 365 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 MVKQ03426 396 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 FGFBP1Q14512 234 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 CHDHQ8NE62 594 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 NAT6Q93015 286 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 SLIT2O94813 1529 aa16.57■□□□□ 0.24
CACNA1A-227ENST00000636549 OR6C65A6NJZ3 312 aa16.56■□□□□ 0.24
CACNA1A-227ENST00000636549 ZBTB8AQ96BR9 441 aa16.56■□□□□ 0.24
CACNA1A-227ENST00000636549 IGKV3-7A0A075B6H7 116 aa16.56■□□□□ 0.24
CACNA1A-227ENST00000636549 KRBOX1C9JBD0 128 aa16.56■□□□□ 0.24
CACNA1A-227ENST00000636549 C1orf105O95561 183 aa16.56■□□□□ 0.24
CACNA1A-227ENST00000636549 CYP4V2Q6ZWL3 525 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-227ENST00000636549 OR13H1Q8NG92 308 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms