RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 HS6ST2Q96MM7 605 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 ZNF385AQ96PM9 386 aaKnown RBP16.66■□□□□ 0.26
CLN6-213ENST00000636212 AMBRA1Q9C0C7 1298 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 FKRPQ9H9S5 495 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 TMEM27Q9HBJ8 222 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 BARX1Q9HBU1 254 aaPredicted RBP16.66■□□□□ 0.26
CLN6-213ENST00000636212 SLC17A5Q9NRA2 495 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 FLNAP21333 2647 aaKnown RBP16.66■□□□□ 0.26
CLN6-213ENST00000636212 ZNF587BE7ETH6 402 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 PDLIM1O00151 329 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 NPIPB7O75200 414 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 LY6G6DO95868 133 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 ZNF43P17038 809 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 CDH2P19022 906 aaPredicted RBP16.65■□□□□ 0.26
CLN6-213ENST00000636212 PAX7P23759 505 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 CD40P25942 277 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 FOXG1P55316 489 aaPredicted RBP16.65■□□□□ 0.26
CLN6-213ENST00000636212 VEZF1Q14119 521 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 PGGHGQ32M88 737 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 CREB3L2Q70SY1 520 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 ARMC8Q8IUR7 673 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 FBXL14Q8N1E6 418 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 CIARTQ8N365 385 aaPredicted RBP16.65■□□□□ 0.26
CLN6-213ENST00000636212 LSMEM1Q8N8F7 131 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 ZIC4Q8N9L1 334 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 THOC1Q96FV9 657 aaKnown RBP16.65■□□□□ 0.26
CLN6-213ENST00000636212 TRAF4Q9BUZ4 470 aaPredicted RBP16.65■□□□□ 0.26
CLN6-213ENST00000636212 C1QTNF6Q9BXI9 259 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 GRIP2Q9C0E4 1043 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 NPHS2Q9NP85 383 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 SLC52A3Q9NQ40 469 aa16.65■□□□□ 0.26
CLN6-213ENST00000636212 TESQ9UGI8 421 aaKnown RBP16.65■□□□□ 0.26
CLN6-213ENST00000636212 HOXB4P17483 251 aaPredicted RBP16.64■□□□□ 0.25
CLN6-213ENST00000636212 RGS8P57771 180 aaPredicted RBP16.64■□□□□ 0.25
CLN6-213ENST00000636212 IL1RL1Q01638 556 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 C1DQ13901 141 aaKnown RBP16.64■□□□□ 0.25
CLN6-213ENST00000636212 NRF1Q16656 503 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 CYP51A1Q16850 503 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 ALG10BQ5I7T1 473 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 FAM69AQ5T7M9 428 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 FAM91A1Q658Y4 838 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 NIPAL3Q6P499 406 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 ULK3Q6PHR2 472 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 C6orf89Q6UWU4 347 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 NET1Q7Z628 596 aaPredicted RBP16.64■□□□□ 0.25
CLN6-213ENST00000636212 DHDDSQ86SQ9 333 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 DTX2Q86UW9 622 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 RANBP3LQ86VV4 465 aaPredicted RBP16.64■□□□□ 0.25
CLN6-213ENST00000636212 C11orf65Q8NCR3 313 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 SLC47A1Q96FL8 570 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 ADAD1Q96M93 576 aaKnown RBP16.64■□□□□ 0.25
CLN6-213ENST00000636212 EPYCQ99645 322 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 DHRS9Q9BPW9 319 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 OBP2BQ9NPH6 170 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 MTORP42345 2549 aa16.64■□□□□ 0.25
CLN6-213ENST00000636212 SETD2Q9BYW2 2564 aaPredicted RBP16.64■□□□□ 0.25
CLN6-213ENST00000636212 ARID1AO14497 2285 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 TRBV5-3A0A0A0MS03 114 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 A0A1B0GWA3 101 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 AIM2O14862 343 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 AKAP8O43823 692 aaKnown RBP16.63■□□□□ 0.25
CLN6-213ENST00000636212 BMP4P12644 408 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 AQP1P29972 269 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 FABP6P51161 128 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 UBE2NP61088 152 aaKnown RBP16.63■□□□□ 0.25
CLN6-213ENST00000636212 RBBP4Q09028 425 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 MFSD13AQ14CX5 517 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 RUNDC3AQ59EK9 446 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 HMBOX1Q6NT76 420 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 WDR31Q8NA23 367 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 TSPEARQ8WU66 669 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 KTI12Q96EK9 354 aaPredicted RBP16.63■□□□□ 0.25
CLN6-213ENST00000636212 KCNS3Q9BQ31 491 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 MRGBPQ9NV56 204 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 ATP23Q9Y6H3 246 aa16.63■□□□□ 0.25
CLN6-213ENST00000636212 TRAV36DV7A0A075B6V5 113 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 A0A0G2JND7 137 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 EDF1O60869 148 aaKnown RBP16.62■□□□□ 0.25
CLN6-213ENST00000636212 VIMP08670 466 aaKnown RBP16.62■□□□□ 0.25
CLN6-213ENST00000636212 SELENOPP49908 381 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 P2RY4P51582 365 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 PPP2R2BQ00005 443 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 EGR4Q05215 589 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 TNK1Q13470 666 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 NFYCQ13952 458 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 METTL21CQ5VZV1 264 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 DLEU7Q6UYE1 221 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 SLC30A8Q8IWU4 369 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 DPP10Q8N608 796 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 OXGR1Q96P68 337 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 CGREF1Q99674 301 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 CPPED1Q9BRF8 314 aaPredicted RBP16.62■□□□□ 0.25
CLN6-213ENST00000636212 PTDSS2Q9BVG9 487 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 MOV10Q9HCE1 1003 aaKnown RBP16.62■□□□□ 0.25
CLN6-213ENST00000636212 CBLN4Q9NTU7 201 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 RCE1Q9Y256 329 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 B3GALT5Q9Y2C3 310 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 ACANP16112 2415 aa16.62■□□□□ 0.25
CLN6-213ENST00000636212 FTCDNL1E5RQL4 147 aa16.61■□□□□ 0.25
CLN6-213ENST00000636212 TPST1O60507 370 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms