RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 SSBP05455 408 aaKnown RBP eCLIP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 LINGO3P0C6S8 592 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 FAM153BP0C7A2 387 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SRGAP2BP0DMP2 458 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 PTBP1P26599 531 aaKnown RBP eCLIP-1.4□□□□□ -2.636e-9■■■□□ 16.9
CDKL5-210ENST00000636046 CASP14P31944 242 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 GPR3P46089 330 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 GABRB2P47870 512 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 HTR5AP47898 357 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 RGS7P49802 495 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 MAP2K6P52564 334 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 EVCP57679 992 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TAS2R19P59542 299 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CHRNB3Q05901 458 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SLC38A11Q08AI6 406 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 RALGDSQ12967 914 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 PDIA5Q14554 519 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 ZNF345Q14585 488 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 LASP1Q14847 261 aaKnown RBP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 VEPH1Q14D04 833 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 EMC2Q15006 297 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 PAFAH1B3Q15102 231 aaKnown RBP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SNRNP35Q16560 246 aaKnown RBP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 DEFB135Q30KP9 77 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 MAP9Q49MG5 647 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TMEM52BQ4KMG9 183 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 GPAT3Q53EU6 434 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 ELFN2Q5R3F8 820 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 C10orf55Q5SWW7 151 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 DDX59Q5T1V6 619 aaKnown RBP eCLIP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 GRTP1Q5TC63 336 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CENPPQ6IPU0 288 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 APOOLQ6UXV4 268 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TEX43Q6ZNM6 134 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 DNM1P46Q6ZS02 220 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 DPPA4Q7L190 304 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 OTUD6AQ7L8S5 288 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 COMMD2Q86X83 199 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 VRK2Q86Y07 508 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 DENND1CQ8IV53 801 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CDKL3Q8IVW4 592 aaPredicted RBP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 MCEMP1Q8IX19 187 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 THNSL1Q8IYQ7 743 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 STK40Q8N2I9 435 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TMEM256Q8N2U0 113 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 WDTC1Q8N5D0 677 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CHST4Q8NCG5 386 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CLRN3Q8NCR9 226 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 OR56A4Q8NGH8 313 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 OR2A12Q8NGT7 310 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 ACTRT1Q8TDG2 376 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 COG1Q8WTW3 980 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CCDC107Q8WV48 283 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 LIPHQ8WWY8 451 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 NCSTNQ92542 709 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TRIM43Q96BQ3 446 aaPredicted RBP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 COA7Q96BR5 231 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SEH1LQ96EE3 360 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 PGM2Q96G03 612 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 VPS39Q96JC1 886 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 LURAP1Q96LR2 239 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 VPS35Q96QK1 796 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 RIT2Q99578 217 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TBX5Q99593 518 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 Q9BRP9 147 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SLC26A6Q9BXS9 759 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 NFKBIZQ9BYH8 718 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 DDX24Q9GZR7 859 aaKnown RBP eCLIP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CLPBQ9H078 707 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 OSGEPL1Q9H4B0 414 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 FNDC4Q9H6D8 234 aaPredicted RBP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SYNDIG1Q9H7V2 258 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 ARMT1Q9H993 441 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 RNPEPL1Q9HAU8 725 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 AS3MTQ9HBK9 375 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CSNK1G1Q9HCP0 422 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 HEYLQ9NQ87 328 aaPredicted RBP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 HELLSQ9NRZ9 838 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SLC39A9Q9NUM3 307 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 BLOC1S4Q9NUP1 217 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SAGE1Q9NXZ1 904 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TAS2R16Q9NYV7 291 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 LUZP4Q9P127 313 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 PRO2289Q9P1D8 64 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 OR1A1Q9P1Q5 309 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 POLKQ9UBT6 870 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 SEC14L4Q9UDX3 406 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 HMGXB4Q9UGU5 601 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 PLAGL1Q9UM63 463 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 ASF1AQ9Y294 204 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 GPR52Q9Y2T5 361 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 DERAQ9Y315 318 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 PCDHGA6Q9Y5G7 932 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TRPV2Q9Y5S1 764 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 CEPT1Q9Y6K0 416 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 KDRP35968 1356 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 TNIKQ9UKE5 1360 aa-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 BAZ1BQ9UIG0 1483 aaKnown RBP-1.4□□□□□ -2.63
CDKL5-210ENST00000636046 BICRAQ9NZM4 1560 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms