RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 TET1Q8NFU7 2136 aa4.66□□□□□ -1.66
SMARCA2-240ENST00000635392 PCNX3Q9H6A9 2034 aa4.65□□□□□ -1.66
SMARCA2-240ENST00000635392 A0A087WWV3 80 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 A0A1B0GVL5 298 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 E9PAM4 449 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 OR7A17O14581 309 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 CDX4O14627 284 aaPredicted RBP4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 SLC16A4O15374 487 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 TRAPPC3O43617 180 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 ATP5A1P25705 553 aaKnown RBP4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 BDH1Q02338 343 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 RIPPLY1Q0D2K3 151 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 KIF26BQ2KJY2 2108 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 SCYL2Q6P3W7 929 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 ERICH1Q86X53 443 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 SHC3Q92529 594 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 DNAJC19Q96DA6 116 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 ZBED6CLQ96FA7 236 aaPredicted RBP4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 COQ2Q96H96 371 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 TMEM80Q96HE8 168 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 GSDMAQ96QA5 445 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 CITED1Q99966 193 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 DUSP16Q9BY84 665 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 GLIPR2Q9H4G4 154 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 ASB7Q9H672 318 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 APMAPQ9HDC9 416 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 TIGARQ9NQ88 270 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 PIPOXQ9P0Z9 390 aa4.65□□□□□ -1.67
SMARCA2-240ENST00000635392 MYO9BQ13459 2157 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 MICAL3Q7RTP6 2002 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 METTL21EPA6NDL7 271 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 FRG2CA6NGY1 282 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 ARL5CA6NH57 179 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 OR6C65A6NJZ3 312 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 HPP00738 406 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 CA1P00915 261 aaPredicted RBP4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 KCNE1P15382 129 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 ZNF44P15621 663 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 HPCAL1P37235 193 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 NDUFA8P51970 172 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 AP3M2P53677 418 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 ST3GAL3Q11203 375 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 RIPK1Q13546 671 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 TGIF1Q15583 401 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 TEX44Q53QW1 395 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 CLLU1OSQ5K130 101 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 C10orf120Q5SQS8 335 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 FAHD2BQ6P2I3 314 aaPredicted RBP4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 VSTM4Q8IW00 320 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 C9orf40Q8IXQ3 194 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 TMEM123Q8N131 208 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 OR2T33Q8NG76 320 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 AENQ8WTP8 325 aaKnown RBP4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 TFB1MQ8WVM0 346 aaKnown RBP4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 N4BP2L2Q92802 583 aaPredicted RBP4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 TOMM40LQ969M1 308 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 SDSLQ96GA7 329 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 FAHD2AQ96GK7 314 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 PAGE5Q96GU1 130 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 PPP1R16AQ96I34 528 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 CPB2Q96IY4 423 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 C7orf34Q96L11 122 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 TGM7Q96PF1 710 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 CDX2Q99626 313 aaPredicted RBP4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 SMOXQ9NWM0 555 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 SENP1Q9P0U3 644 aa4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 PTBP2Q9UKA9 531 aaKnown RBP4.64□□□□□ -1.67
SMARCA2-240ENST00000635392 A0A1B0GU03 582 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 ZNF233A6NK53 670 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 TRIM64CA6NLI5 447 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 NPIPA7E9PJI5 369 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 K7ENP7 123 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 B4GALT5O43286 388 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 CALUO43852 315 aaPredicted RBP4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 STX10O60499 249 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 FGFR1OPO95684 399 aaKnown RBP4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 IL1BP01584 269 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 H2BFMP0C1H6 154 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 NPIPA8P0DM63 369 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 PCMT1P22061 227 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 LAP3P28838 519 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 NMT1P30419 496 aaKnown RBP4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 TAGLN2P37802 199 aaKnown RBP4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 GNPDA1P46926 289 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 P2RY1P47900 373 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 VLDLRP98155 873 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 ENPEPQ07075 957 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 RAB40BQ12829 278 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 ELAVL3Q14576 367 aaKnown RBP4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 KCNJ11Q14654 390 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 LPAL2Q16609 132 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 XKR4Q5GH76 650 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 MEDAGQ5VYS4 303 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 UFSP1Q6NVU6 142 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 SYT10Q6XYQ8 523 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 ACOT1Q86TX2 421 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 LCA5Q86VQ0 697 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 NAXDQ8IW45 347 aa4.63□□□□□ -1.67
SMARCA2-240ENST00000635392 C12orf56Q8IXR9 622 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms