RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 HBA1P69905 142 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 RELAQ04206 551 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CHRNEQ04844 493 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TFF3Q07654 80 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 RBBP4Q09028 425 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 NPRL3Q12980 569 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 RUNX2Q13950 521 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 SLC10A1Q14973 349 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 PRSS48Q7RTY5 328 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CDC20BQ86Y33 519 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ENTHD1Q8IYW4 607 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CA13Q8N1Q1 262 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 OR4A15Q8NGL6 344 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 C16orf78Q8WTQ4 265 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 CHPT1Q8WUD6 406 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 MAL2Q969L2 176 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TAMM41Q96BW9 452 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 MTERF3Q96E29 417 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ACOT13Q9NPJ3 140 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 PLCXD1Q9NUJ7 323 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ADPRHL2Q9NX46 363 aa4.38□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF223Q9UK11 482 aaPredicted RBP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 NUP214P35658 2090 aaPredicted RBP4.38□□□□□ -1.71
LINC00550-201ENST00000629293 TRGV5A0A0B4J1U4 118 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 C17orf105B2RV13 164 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PTGES3LE9PB15 166 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 RRM2P31350 389 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 IDUAP35475 653 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 RPL3P39023 403 aaKnown RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 OPRL1P41146 370 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 MAP2K4P45985 399 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 STXBP1P61764 594 aaKnown RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 RPP38P78345 283 aaKnown RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PRR5P85299 388 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 FADDQ13158 208 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 NPTX1Q15818 432 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SMN1Q16637 294 aaKnown RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ADPRMQ3LIE5 342 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PAGE2BQ5JRK9 111 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 KHDC1LQ5JSQ8 128 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 GCNT6Q5T4J0 391 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 UBE2UQ5VVX9 321 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 DCDC5Q6ZRR9 648 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 IKBIPQ70UQ0 350 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 LGI4Q8N135 537 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 NFAM1Q8NET5 270 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 C16orf52Q8NHV5 167 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 CDC26Q8NHZ8 85 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 IPCEF1Q8WWN9 437 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 DAZLQ92904 295 aaKnown RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SARAFQ96BY9 339 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 F2RL3Q96RI0 385 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF717Q9BY31 904 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 COPS7AQ9UBW8 275 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 AASSQ9UDR5 926 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 FAM215AQ9Y5M1 114 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 PMF1-BGLAPU3KQ54 211 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 GNG14A0A1W2PPG7 69 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TUBAL3A6NHL2 446 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ADAMDEC1O15204 470 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 RGS10O43665 173 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF354AO60765 605 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TBX19O60806 448 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 C6orf47O95873 294 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TBX6O95947 436 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ANXA2P07355 339 aaKnown RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 RFPL3SP0C7P2 107 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ETFAP13804 333 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 IGFBP2P18065 325 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 GABRB1P18505 474 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 GDF1P27539 372 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 GGT2P36268 569 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 RANBP1P43487 201 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 GPR143P51810 404 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 CSNK2BP67870 215 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ADAM8P78325 824 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TMED1Q13445 227 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TRIM40Q6P9F5 258 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 CLEC9AQ6UXN8 241 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TMIGD1Q6UXZ0 262 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 LUZP2Q86TE4 346 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 IGFN1Q86VF2 1251 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 FAM109AQ8N4B1 249 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 DYNC2LI1Q8TCX1 351 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 RORBQ92753 470 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 CIDECQ96AQ7 238 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SH3YL1Q96HL8 342 aaPredicted RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 TPD52L3Q96J77 140 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF347Q96SE7 839 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 FAM173AQ9BQD7 235 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SLC35A5Q9BS91 424 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 BCO1Q9HAY6 547 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SACM1LQ9NTJ5 587 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ATAD3AQ9NVI7 634 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SCN3BQ9NY72 215 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 KIF17Q9P2E2 1029 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 WARS2Q9UGM6 360 aaKnown RBP4.37□□□□□ -1.71
LINC00550-201ENST00000629293 SLC23A1Q9UHI7 598 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 ERGIC3Q9Y282 383 aa4.37□□□□□ -1.71
LINC00550-201ENST00000629293 IGKV3D-11A0A0A0MRZ8 115 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms