RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 VLDLRP98155 873 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 LTBQ06643 244 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 SLC17A1Q14916 467 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 PGM2L1Q6PCE3 622 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 ACBD4Q8NC06 268 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 TMEM255BQ8WV15 326 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 HS6ST2Q96MM7 605 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 MOGAT1Q96PD6 335 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 FNDC11Q9BVV2 318 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 RBM24Q9BX46 236 aaKnown RBP18.04■□□□□ 0.48
PTCD3-220ENST00000627371 ENKD1Q9H0I2 346 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 C12orf49Q9H741 205 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 MAN2C1Q9NTJ4 1040 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 NDUFAF4Q9P032 175 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 B3GALT5Q9Y2C3 310 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 CORINQ9Y5Q5 1042 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 M0R082 166 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 KPNA4O00629 521 aaPredicted RBP18.03■□□□□ 0.48
PTCD3-220ENST00000627371 IGF2P01344 180 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 UQCRC1P31930 480 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 UGT2B15P54855 530 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 TRAP1Q12931 704 aaKnown RBP18.03■□□□□ 0.48
PTCD3-220ENST00000627371 TRAM2Q15035 370 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF74Q16587 644 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 SP5Q6BEB4 398 aaPredicted RBP18.03■□□□□ 0.48
PTCD3-220ENST00000627371 TMEM225Q6GV28 225 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF474Q6S9Z5 364 aaPredicted RBP18.03■□□□□ 0.48
PTCD3-220ENST00000627371 GALNT5Q7Z7M9 940 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 SCAIQ8N9R8 606 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF610Q8N9Z0 462 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 ADPRHL1Q8NDY3 354 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF417Q8TAU3 575 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 TMEM239Q8WW34 195 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF587Q96SQ5 575 aaPredicted RBP18.03■□□□□ 0.48
PTCD3-220ENST00000627371 MEPEQ9NQ76 525 aaPredicted RBP18.03■□□□□ 0.48
PTCD3-220ENST00000627371 GALNT8Q9NY28 637 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 C6orf203Q9P0P8 240 aaPredicted RBP18.03■□□□□ 0.48
PTCD3-220ENST00000627371 RHCGQ9UBD6 479 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 SEC14L4Q9UDX3 406 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 RASD1Q9Y272 281 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 FAM32AQ9Y421 112 aaKnown RBP18.03■□□□□ 0.48
PTCD3-220ENST00000627371 FLVCR1Q9Y5Y0 555 aa18.03■□□□□ 0.48
PTCD3-220ENST00000627371 TCRBV5S2A0A599 114 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 LRRN3E7EW58 273 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 hCG_2039718K7EN88 272 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 ACOT8O14734 319 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 GSC2O15499 205 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 STAMBPO95630 424 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 MT-ND1P03886 318 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 ITGA2P17301 1181 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 RHCEP18577 417 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 FUT4P22083 530 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 CBLP22681 906 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 PCYT1AP49585 367 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 POU4F3Q15319 338 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 IQCCQ4KMZ1 466 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 TFAP2EQ6VUC0 442 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 H1FNTQ75WM6 255 aaPredicted RBP18.02■□□□□ 0.48
PTCD3-220ENST00000627371 GPAT4Q86UL3 456 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 STK32CQ86UX6 486 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 C10orf53Q8N6V4 93 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 PIK3C3Q8NEB9 887 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 OR9K2Q8NGE7 335 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 MCUR1Q96AQ8 359 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF775Q96BV0 537 aaPredicted RBP18.02■□□□□ 0.48
PTCD3-220ENST00000627371 ASPNQ9BXN1 380 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 CADM1Q9BY67 442 aaKnown RBP18.02■□□□□ 0.48
PTCD3-220ENST00000627371 KLHL4Q9C0H6 718 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 FKRPQ9H9S5 495 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 MRPL39Q9NYK5 338 aaKnown RBP18.02■□□□□ 0.48
PTCD3-220ENST00000627371 NOSIPQ9Y314 301 aaKnown RBP18.02■□□□□ 0.48
PTCD3-220ENST00000627371 MED31Q9Y3C7 131 aa18.02■□□□□ 0.48
PTCD3-220ENST00000627371 ANKHD1Q8IWZ3 2542 aaKnown RBP18.01■□□□□ 0.47
PTCD3-220ENST00000627371 FLNBO75369 2602 aaKnown RBP18.01■□□□□ 0.47
PTCD3-220ENST00000627371 ENO4A6NNW6 628 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 PEX19P40855 299 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 OR3A2P47893 321 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 SORDQ00796 357 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 FOXD4Q12950 439 aaPredicted RBP18.01■□□□□ 0.47
PTCD3-220ENST00000627371 PFN4Q8NHR9 129 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 POP5Q969H6 163 aaKnown RBP18.01■□□□□ 0.47
PTCD3-220ENST00000627371 LRGUKQ96M69 825 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 SPOCK3Q9BQ16 436 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 TRIM15Q9C019 465 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 ANKRD19PQ9H560 264 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 NMNAT1Q9HAN9 279 aaPredicted RBP18.01■□□□□ 0.47
PTCD3-220ENST00000627371 IL1RAPQ9NPH3 570 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 ELOVL5Q9NYP7 299 aa18.01■□□□□ 0.47
PTCD3-220ENST00000627371 CRYBG3Q68DQ2 2970 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 CH25HO95992 272 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 FABP3P05413 133 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 NQO1P15559 274 aaKnown RBP18■□□□□ 0.47
PTCD3-220ENST00000627371 CD79BP40259 229 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 HIST2H2BCQ6DN03 193 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 MEX3BQ6ZN04 569 aaKnown RBP18■□□□□ 0.47
PTCD3-220ENST00000627371 BEND4Q6ZU67 534 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 SLC46A3Q7Z3Q1 461 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 KIF18BQ86Y91 864 aa18■□□□□ 0.47
PTCD3-220ENST00000627371 DMRTC2Q8IXT2 367 aaPredicted RBP18■□□□□ 0.47
PTCD3-220ENST00000627371 TMEM45BQ96B21 275 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms