RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PTGES2Q9H7Z7 377 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 FBXL2Q9UKC9 423 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 EP300Q09472 2414 aaPredicted RBP19.42■□□□□ 0.7
SPAST-204ENST00000621856 TEX13CA0A0J9YWL9 993 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 CCDC182A6NF36 153 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 SHISA8B8ZZ34 492 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 OR2T1O43869 369 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 TCEA1P23193 301 aaKnown RBP19.41■□□□□ 0.7
SPAST-204ENST00000621856 RBMS1P29558 406 aaKnown RBP19.41■□□□□ 0.7
SPAST-204ENST00000621856 B3GNTL1Q67FW5 361 aaPredicted RBP19.41■□□□□ 0.7
SPAST-204ENST00000621856 IL22RA1Q8N6P7 574 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 FADS6Q8N9I5 356 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 PSD4Q8NDX1 1056 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 OR9Q1Q8NGQ5 310 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 PAQR8Q8TEZ7 354 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 MRGPRX4Q96LA9 322 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 Q96M85 177 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 TEAD3Q99594 435 aa19.41■□□□□ 0.7
SPAST-204ENST00000621856 TRIM64BA6NI03 449 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 GYPBP06028 91 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 APEHP13798 732 aaKnown RBP19.4■□□□□ 0.7
SPAST-204ENST00000621856 SLC2A5P22732 501 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 RGS6P49758 472 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 DBPQ10586 325 aaPredicted RBP19.4■□□□□ 0.7
SPAST-204ENST00000621856 AQP6Q13520 282 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 SLC25A53Q5H9E4 307 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 H3F3CQ6NXT2 135 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 JAZF1Q86VZ6 243 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 WDSUB1Q8N9V3 476 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 LSM14AQ8ND56 463 aaKnown RBP19.4■□□□□ 0.7
SPAST-204ENST00000621856 OR5J2Q8NH18 312 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 KISS1RQ969F8 398 aaPredicted RBP19.4■□□□□ 0.7
SPAST-204ENST00000621856 DDIT4LQ96D03 193 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 OPALINQ96PE5 141 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 NMNAT3Q96T66 252 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 ASPNQ9BXN1 380 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 ANGPTL4Q9BY76 406 aa19.4■□□□□ 0.7
SPAST-204ENST00000621856 TMEM129A0AVI4 362 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 ETV2O00321 342 aaPredicted RBP19.39■□□□□ 0.7
SPAST-204ENST00000621856 TSPAN19P0C672 248 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 TFPIP10646 304 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 GADD45AP24522 165 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 GRPRP30550 384 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 SDHAP31040 664 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 LIMK1P53667 647 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 WNT4P56705 351 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 DOC2BQ14184 412 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 SPCS2Q15005 226 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 SGCBQ16585 318 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 LHFPL3Q86UP9 236 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 PLCZ1Q86YW0 608 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 GHDCQ8N2G8 530 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 NKD1Q969G9 470 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 C1GALT1C1Q96EU7 318 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 THOC3Q96J01 351 aaKnown RBP19.39■□□□□ 0.7
SPAST-204ENST00000621856 FRMD6Q96NE9 622 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 SERINC1Q9NRX5 453 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 WDR70Q9NW82 654 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 GRHPRQ9UBQ7 328 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 IL17BQ9UHF5 180 aa19.39■□□□□ 0.7
SPAST-204ENST00000621856 C11orf98E9PRG8 122 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 CCRL2O00421 344 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 IMPA2O14732 288 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 SLC22A1O15245 554 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 ZNF208O43345 1280 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 AIREO43918 545 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 OR6A2O95222 327 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 IGHA1P01876 353 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 LIMS3P0CW19 117 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 LIMS4P0CW20 117 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 CSRP1P21291 193 aaKnown RBP19.39■□□□□ 0.69
SPAST-204ENST00000621856 VBP1P61758 197 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 LGALS3BPQ08380 585 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 ACER2Q5QJU3 275 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 OR2G6Q5TZ20 316 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 ZNF468Q5VIY5 522 aaPredicted RBP19.39■□□□□ 0.69
SPAST-204ENST00000621856 LEG1Q6P5S2 330 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 FAM122BQ7Z309 247 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 NPEPL1Q8NDH3 523 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 RPL3LQ92901 407 aaKnown RBP19.39■□□□□ 0.69
SPAST-204ENST00000621856 SH2D2AQ9NP31 389 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 SEC14L4Q9UDX3 406 aa19.39■□□□□ 0.69
SPAST-204ENST00000621856 G3V3Y1 287 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 RNF13O43567 381 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 BCL10O95999 233 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 SCG5P05408 212 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 MRPL3P09001 348 aaKnown RBP19.38■□□□□ 0.69
SPAST-204ENST00000621856 ZNF182P17025 639 aaPredicted RBP19.38■□□□□ 0.69
SPAST-204ENST00000621856 CD82P27701 267 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 GTF2E2P29084 291 aaKnown RBP19.38■□□□□ 0.69
SPAST-204ENST00000621856 CLK1P49759 484 aaKnown RBP19.38■□□□□ 0.69
SPAST-204ENST00000621856 LCN1P1Q5VSP4 162 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 SLC6A19Q695T7 634 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 OR6S1Q8NH40 331 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 POC1BQ8TC44 478 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 SGCZQ96LD1 299 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 ANKRD10Q9NXR5 420 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 TAS2R5Q9NYW4 299 aa19.38■□□□□ 0.69
SPAST-204ENST00000621856 AHCYP23526 432 aa19.37■□□□□ 0.69
SPAST-204ENST00000621856 MAP2K6P52564 334 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms