RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 POLR2J3Q9H1A7 115 aaKnown RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 CWH43Q9H720 699 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 CERS4Q9HA82 394 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 ABRACLQ9P1F3 81 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 GAB2Q9UQC2 676 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 NPFFR2Q9Y5X5 522 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 MGAT4DA6NG13 374 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 A6NLC8 198 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 A8MWP6 167 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 RNF13O43567 381 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 OR10H2O60403 315 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 YIF1AO95070 293 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 FARS2O95363 451 aaKnown RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 IFNA17P01571 189 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 ANXA4P09525 319 aaPredicted RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 MAS1LP35410 378 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 OR2B8PP59922 312 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 ADGRF1Q5T601 910 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 CXorf57Q6NSI4 855 aaKnown RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 PRSS45Q7RTY3 260 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 OR52B4Q8NGK2 314 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 VWCEQ96DN2 955 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 IGSF21Q96ID5 467 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 TGM7Q96PF1 710 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 SLC12A9Q9BXP2 914 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 PTGES2Q9H7Z7 377 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 TMEM27Q9HBJ8 222 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 MRPL17Q9NRX2 175 aaKnown RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 ZNF282Q9UDV7 671 aaPredicted RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 FBXL4Q9UKA2 621 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 TNFSF18Q9UNG2 199 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 TRBV4-1A0A0J9YWV2 114 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 GNG14A0A1W2PPG7 69 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 ZNF705EA8MWA4 302 aaPredicted RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 K7ERQ8 282 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 ADAM10O14672 748 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 DLEU1O43261 78 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 NSG1P42857 185 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 OR10A3P58181 314 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 SMAD4Q13485 552 aaKnown RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 GINS1Q14691 196 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 OR10K2Q6IF99 312 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 SLC36A4Q6YBV0 504 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 POGLUT1Q8NBL1 392 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 OR4K1Q8NGD4 311 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 NOL4LQ96MY1 436 aaPredicted RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 ZNF649Q9BS31 505 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TRMT61BQ9BVS5 477 aaKnown RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 SUCNR1Q9BXA5 334 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 MTIF3Q9H2K0 278 aaKnown RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 PRO1933Q9H354 126 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 MAN2C1Q9NTJ4 1040 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 GPATCH2Q9NW75 528 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 MRPL15Q9P015 296 aaKnown RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 CHTOPQ9Y3Y2 248 aaKnown RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 TIMM10BQ9Y5J6 103 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TBC1D3DA0A087WVF3 549 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TBC1D3IA0A087WXS9 549 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TBC1D3EA0A087X179 549 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TBC1D3KA0A087X1G2 549 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 GSAPA4D1B5 854 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TBC1D3FA6NER0 549 aaPredicted RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 TBC1D3LB9A6J9 549 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 GABARAPH6UMI1 98 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 RPL36A-HNRNPH2H7BZ11 118 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 RTCAO00442 366 aaKnown RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 MOSPD3O75425 235 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 EFEMP2O95967 443 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 CD8AP01732 235 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 ASGR2P07307 311 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 C8GP07360 202 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 VSIG10L2P0DP72 767 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 CD22P20273 847 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 CDK6Q00534 326 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 KRBOX4Q5JUW0 171 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TBC1D3CQ6IPX1 549 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 ADNP2Q6IQ32 1131 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 DNAJB7Q7Z6W7 309 aaPredicted RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 LRRTM1Q86UE6 522 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 VRK3Q8IV63 474 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TBC1D3Q8IZP1 549 aaPredicted RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 GTPBP8Q8N3Z3 284 aaPredicted RBP9.55□□□□□ -0.88
VPS11-207ENST00000620429 LRRC18Q8N456 261 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 HORMAD2Q8N7B1 307 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 ZNF558Q96NG5 402 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 SLC35A5Q9BS91 424 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 UBQLN3Q9H347 655 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 MAP4K5Q9Y4K4 846 aa9.55□□□□□ -0.88
VPS11-207ENST00000620429 TRBC2A0A5B9 178 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 ANKRD20A5PA0PJZ0 165 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 SERTM1A2A2V5 107 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 IDSB3KWA1 339 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 SYT5O00445 386 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 FAAHO00519 579 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 HOXA2O43364 376 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 F10P00742 488 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 SLC25A4P12235 298 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 C6P13671 934 aa9.54□□□□□ -0.88
VPS11-207ENST00000620429 ZNF25P17030 456 aaPredicted RBP9.54□□□□□ -0.88
VPS11-207ENST00000620429 S1PR1P21453 382 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms