RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 PAQR6Q6TCH4 344 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 FAM180AQ6UWF9 173 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 CDK20Q8IZL9 346 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 SLC43A2Q8N370 569 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 TMEM156Q8N614 296 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 GALNT11Q8NCW6 608 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 CNOT9Q92600 299 aaKnown RBP19.56■□□□□ 0.72
SGMS1-210ENST00000619438 SENP5Q96HI0 755 aaPredicted RBP19.56■□□□□ 0.72
SGMS1-210ENST00000619438 SAMD8Q96LT4 415 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 Q9N2J8 555 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 DNAJB12Q9NXW2 375 aaKnown RBP19.56■□□□□ 0.72
SGMS1-210ENST00000619438 MED31Q9Y3C7 131 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 MAGEB3O15480 346 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 IGKV1D-16P01601 117 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 OCM2P0CE71 109 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 OCMP0CE72 109 aaPredicted RBP19.55■□□□□ 0.72
SGMS1-210ENST00000619438 CD46P15529 392 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 MAKP20794 623 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 SSTR4P31391 388 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 ETV6P41212 452 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF45Q02386 682 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 FGFBP1Q14512 234 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 OXA1LQ15070 435 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 GID4Q8IVV7 300 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 OR52L1Q8NGH7 329 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 GRHL3Q8TE85 626 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 ART5Q96L15 291 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 SIGLEC12Q96PQ1 595 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 OR52D1Q9H346 318 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 KLHL1Q9NR64 748 aa19.55■□□□□ 0.72
SGMS1-210ENST00000619438 ASH1LQ9NR48 2969 aaKnown RBP19.54■□□□□ 0.72
SGMS1-210ENST00000619438 RP1L1Q8IWN7 2480 aaPredicted RBP19.54■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF670-ZNF695F2Z2N8 137 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 BHLHE40O14503 412 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 ITGA10O75578 1167 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 IGHA1P01876 353 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 IFI30P13284 250 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 TBXA2RP21731 343 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 ACAA2P42765 397 aaKnown RBP19.54■□□□□ 0.72
SGMS1-210ENST00000619438 FXYD6P3P58550 94 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 RPS3AP61247 264 aaKnown RBP19.54■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF267Q14586 743 aaPredicted RBP19.54■□□□□ 0.72
SGMS1-210ENST00000619438 NPSR1Q6W5P4 371 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF550Q7Z398 422 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 LNX2Q8N448 690 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF321PQ8N8H1 164 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF615Q8N8J6 731 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF485Q8NCK3 441 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 OR5L2Q8NGL0 311 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 FANK1Q8TC84 345 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 BPIFA2Q96DR5 249 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 C5orf34Q96MH7 638 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 CNPPD1Q9BV87 410 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 CBLCQ9ULV8 474 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 SSR3Q9UNL2 185 aa19.54■□□□□ 0.72
SGMS1-210ENST00000619438 CDK2AP1O14519 115 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 DDAH2O95865 285 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 LIMS3P0CW19 117 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 LIMS4P0CW20 117 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 CT45A8P0DMV1 189 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 CT45A9P0DMV2 189 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 S100A5P33763 92 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 ATP12AP54707 1039 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 ACSM1Q08AH1 577 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.53■□□□□ 0.72
SGMS1-210ENST00000619438 CT45A2Q5DJT8 189 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 BCORP1Q8N888 145 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 OR7G1Q8NGA0 311 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 PFN4Q8NHR9 129 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 ASPNQ9BXN1 380 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 FLRT3Q9NZU0 649 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 YARS2Q9Y2Z4 477 aaKnown RBP19.53■□□□□ 0.72
SGMS1-210ENST00000619438 SHANK1Q9Y566 2161 aa19.53■□□□□ 0.72
SGMS1-210ENST00000619438 A0A1B0GWA3 101 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 HRKO00198 91 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 PRKNO60260 465 aaPredicted RBP19.52■□□□□ 0.72
SGMS1-210ENST00000619438 CH25HO95992 272 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 BMP7P18075 431 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 GNLYP22749 145 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 RNF4P78317 190 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 IFITM3Q01628 133 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 ARMC4Q5T2S8 1044 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF468Q5VIY5 522 aaPredicted RBP19.52■□□□□ 0.72
SGMS1-210ENST00000619438 LINC00114Q6XXX2 140 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 PSD4Q8NDX1 1056 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 OR4N2Q8NGD1 307 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF721Q8TF20 911 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 ABTB1Q969K4 478 aaPredicted RBP19.52■□□□□ 0.72
SGMS1-210ENST00000619438 C6orf62Q9GZU0 229 aaPredicted RBP19.52■□□□□ 0.72
SGMS1-210ENST00000619438 OR10A5Q9H207 317 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 C20orf141Q9NUB4 165 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 MYOTQ9UBF9 498 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 PRODH2Q9UF12 536 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 BAIAP2Q9UQB8 552 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 SIGLEC7Q9Y286 467 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 DTX4Q9Y2E6 619 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 CARD8Q9Y2G2 431 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 UGT2A1Q9Y4X1 527 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 CPAMD8Q8IZJ3 1885 aa19.52■□□□□ 0.72
SGMS1-210ENST00000619438 ISPDA4D126 451 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms