RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 PLEKHF2Q9H8W4 249 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 JMJD1CQ15652 2540 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 IGKV1D-42A0A075B6H8 117 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.12□□□□□ -0.15
BRCA1-228ENST00000618469 CCT8L1PA6NM43 557 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 CPSF4LA6NMK7 179 aaKnown RBP14.12□□□□□ -0.15
BRCA1-228ENST00000618469 FTCDNL1E5RQL4 147 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 AIM2O14862 343 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 TPST2O60704 377 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 CNOT4O95628 575 aaKnown RBP14.12□□□□□ -0.15
BRCA1-228ENST00000618469 C8BP07358 591 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 INHBBP09529 407 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 DRD4P21917 467 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 IGHV1-2P23083 117 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 NTF4P34130 210 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 CRYBA2P53672 197 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 NPTX1Q15818 432 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 STK11Q15831 433 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 BEX5Q5H9J7 111 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 FBXW9Q5XUX1 488 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 C5orf46Q6UWT4 87 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 ARPINQ7Z6K5 226 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 TREML1Q86YW5 311 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 P3H2Q8IVL5 708 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 OR2T12Q8NG77 320 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 OR6T1Q8NGN1 323 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 MFSD8Q8NHS3 518 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 RASSF5Q8WWW0 418 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 SLC47A1Q96FL8 570 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 C18orf12Q96KH6 178 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 HDHD5Q9BXW7 423 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 MALT1Q9UDY8 824 aa14.12□□□□□ -0.15
BRCA1-228ENST00000618469 TRAV36DV7A0A075B6V5 113 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 FMO6PO60774 539 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 RAD51DO75771 328 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 RAF1P04049 648 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 PCSK6P29122 969 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 NUDT2P50583 147 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 P2RY4P51582 365 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 CDH12P55289 794 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 TAB1Q15750 504 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 LRRC23Q53EV4 343 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-228ENST00000618469 SWT1Q5T5J6 900 aaKnown RBP14.11□□□□□ -0.15
BRCA1-228ENST00000618469 FAM69AQ5T7M9 428 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 TMEM225Q6GV28 225 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 CCDC80Q76M96 950 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 CPLX4Q7Z7G2 160 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 RBM45Q8IUH3 476 aaKnown RBP14.11□□□□□ -0.15
BRCA1-228ENST00000618469 OR4D11Q8NGI4 311 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 NANOS1Q8WY41 292 aaKnown RBP14.11□□□□□ -0.15
BRCA1-228ENST00000618469 TMEM45BQ96B21 275 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 ZNF583Q96ND8 569 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 ZNF385AQ96PM9 386 aaKnown RBP14.11□□□□□ -0.15
BRCA1-228ENST00000618469 SF3B5Q9BWJ5 86 aaKnown RBP14.11□□□□□ -0.15
BRCA1-228ENST00000618469 UBTD1Q9HAC8 227 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 SEC14L4Q9UDX3 406 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 EDARQ9UNE0 448 aa14.11□□□□□ -0.15
BRCA1-228ENST00000618469 A0A087WUJ7 227 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 M0R082 166 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 KLF4O43474 513 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 SNX3O60493 162 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 CBLP22681 906 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 LOXP28300 417 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-228ENST00000618469 FAPQ12884 760 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 VEZF1Q14119 521 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 KEAP1Q14145 624 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 DEFB113Q30KQ7 82 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 ENTPD8Q5MY95 495 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 ZNF613Q6PF04 617 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 AAED1Q7RTV5 226 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 MICU2Q8IYU8 434 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 ZNF417Q8TAU3 575 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 PROX1Q92786 737 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 TAAR8Q969N4 342 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 PLPPR2Q96GM1 343 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 ZNF587Q96SQ5 575 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-228ENST00000618469 EPYCQ99645 322 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 PARPBPQ9NWS1 579 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 ASB6Q9NWX5 421 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 CMTM6Q9NX76 183 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 UPB1Q9UBR1 384 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 RASD1Q9Y272 281 aa14.1□□□□□ -0.15
BRCA1-228ENST00000618469 CIB4A0PJX0 185 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 GMNCA6NCL1 334 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 CHP2O43745 196 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 OR2T1O43869 369 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 FZD7O75084 574 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 VAMP5O95183 116 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 ATE1O95260 518 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 LY6G6DO95868 133 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 GGT1P19440 569 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 TNFRSF1BP20333 461 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 GRPRP30550 384 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 SLC7A2P52569 658 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 NR1H2P55055 460 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 IL1RL1Q01638 556 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 TSPO2Q5TGU0 170 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 C9orf135Q5VTT2 229 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 CARM1Q86X55 608 aa14.09□□□□□ -0.15
BRCA1-228ENST00000618469 ZNF433Q8N7K0 673 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms