RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 RNF144AP50876 292 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CCR4P51679 360 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 GABREP78334 506 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 IL13RA1P78552 427 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 FAM182BQ5T319 152 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 LINGO4Q6UY18 593 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 FAM220AQ7Z4H9 259 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 GALNTL5Q7Z4T8 443 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 GPR137CQ8N3F9 429 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SLC30A7Q8NEW0 376 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 HSD17B8Q92506 261 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 RGP1Q92546 391 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ATG4CQ96DT6 458 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 C4orf36Q96KX1 117 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 FAM193BQ96PV7 902 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 NDUFAF3Q9BU61 184 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SARGQ9BW04 601 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CST11Q9H112 138 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 DPEP2Q9H4A9 486 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SLC32A1Q9H598 525 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CCDC86Q9H6F5 360 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 MVB12BQ9H7P6 319 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CARHSP1Q9Y2V2 147 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 A6NNC1 897 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 M0R3H8 397 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 DLEU1O43261 78 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 MAFKO60675 156 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 RPP14O95059 124 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 NDUFB6O95139 128 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ACTL6AO96019 429 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ERCC1P07992 297 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CASRP41180 1078 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PNPLA4P41247 253 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PTGER3P43115 390 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ARF3P61204 181 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ARF1P84077 181 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 MOGAT2Q3SYC2 334 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 AFMIDQ63HM1 303 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PODNL1Q6PEZ8 512 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ZNF322Q6U7Q0 402 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 LRRC69Q6ZNQ3 347 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CCDC117Q8IWD4 279 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 RNF175Q8N4F7 328 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ARL14Q8N4G2 192 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CLDN19Q8N6F1 224 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 OR4C5Q8NGB2 326 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 THAP4Q8WY91 577 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 RAB39BQ96DA2 213 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 FAM46AQ96IP4 442 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SYT17Q9BSW7 474 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SELENOIQ9C0D9 397 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SLC25A19Q9HC21 320 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PARD6AQ9NPB6 346 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PIPOXQ9P0Z9 390 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 RNF24Q9Y225 148 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SCN4AP35499 1836 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 OR52A4PA6NMU1 304 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 EIF1AYO14602 144 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 NME2P1O60361 137 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ZNF888P0CJ79 500 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ALPPL2P10696 532 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ITPKBP27987 946 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 BTCP35070 178 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CTSOP43234 321 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 XCR1P46094 333 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 EIF1AXP47813 144 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 NRG3P56975 720 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 RAB1AP62820 205 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SRSF3P84103 164 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CBFBQ13951 182 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SLBPQ14493 270 aaKnown RBP eCLIP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 DEFB115Q30KQ5 88 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ARSJQ5FYB0 599 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 NKAIN2Q5VXU1 208 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ABLIM2Q6H8Q1 611 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 LINC00471Q8N535 108 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 C11orf42Q8N5U0 333 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 OIT3Q8WWZ8 545 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 MRPL38Q96DV4 380 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 RAB33BQ9H082 229 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ICKQ9UPZ9 632 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CSAG2Q9Y5P2 127 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 NPFFR2Q9Y5X5 522 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ELOA3CA0A087WX78 387 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PMS2P2O95744 297 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PTBP3O95758 552 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 AIFM1O95831 613 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 HEXAP06865 529 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CHRM4P08173 479 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 ADRA2AP08913 450 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 HOXB5P09067 269 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 HOXA5P20719 270 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PRSS3P35030 304 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 OR3A1P47881 315 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 SEMG2Q02383 582 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 KLF9Q13886 244 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 EIF2B1Q14232 305 aaKnown RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 KCNAB1Q14722 419 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 TP53I3Q53FA7 332 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms