RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PYDC1Q8WXC3 89 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 SLC38A4Q969I6 547 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 ZNF524Q96C55 264 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 MPP4Q96JB8 637 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 NPAS1Q99742 590 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 REEP1Q9H902 201 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 CALHM2Q9HA72 323 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 PCNX3Q9H6A9 2034 aa13.29□□□□□ -0.28
UBXN1-218ENST00000616865 A0A1W2PPR1 153 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 TMEM72A0PK05 275 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 A8MVM7 634 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 ETV2O00321 342 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-218ENST00000616865 SEC14L5O43304 696 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 DEAF1O75398 565 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-218ENST00000616865 TIPRLO75663 272 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 NTN1O95631 604 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 OPN1LWP04000 364 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 TMIGD3P0DMS9 266 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-218ENST00000616865 CD53P19397 219 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 RRM2P31350 389 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 MAGEA2P43356 314 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 STARP49675 285 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 MAP2K6P52564 334 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 GFRA1P56159 465 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 SRYQ05066 204 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 POU4F3Q15319 338 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 TMEM176BQ3YBM2 270 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-218ENST00000616865 OR2T5Q6IEZ7 315 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 ADGRG3Q86Y34 549 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 PAPD5Q8NDF8 572 aaKnown RBP13.28□□□□□ -0.28
UBXN1-218ENST00000616865 OR2T29Q8NH02 315 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 OR52J3Q8NH60 311 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 ZPLD1Q8TCW7 415 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 SLCO4A1Q96BD0 722 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 DUS3LQ96G46 650 aaKnown RBP13.28□□□□□ -0.28
UBXN1-218ENST00000616865 HS6ST2Q96MM7 605 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 OR5B2Q96R09 309 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 EPYCQ99645 322 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 NMNAT1Q9HAN9 279 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-218ENST00000616865 ARMC1Q9NVT9 282 aa13.28□□□□□ -0.28
UBXN1-218ENST00000616865 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-218ENST00000616865 A0A087WUJ7 227 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 H0Y3Z8 333 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 TNFRSF11BO00300 401 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 EIF1AYO14602 144 aaKnown RBP13.27□□□□□ -0.29
UBXN1-218ENST00000616865 FFAR1O14842 300 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 ZNF208O43345 1280 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 E2F6O75461 281 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 KRT36O76013 467 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 AHSA1O95433 338 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 IL11P20809 199 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 PTNP21246 168 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 FASP25445 335 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 CLK1P49759 484 aaKnown RBP13.27□□□□□ -0.29
UBXN1-218ENST00000616865 RPS3AP61247 264 aaKnown RBP13.27□□□□□ -0.29
UBXN1-218ENST00000616865 FOXF2Q12947 444 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 BCL2A1Q16548 175 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 SYT14P1Q58G82 188 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 C5orf46Q6UWT4 87 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 ZNF730Q6ZMV8 503 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 TSEN54Q7Z6J9 526 aaKnown RBP13.27□□□□□ -0.29
UBXN1-218ENST00000616865 TSPYL5Q86VY4 417 aaPredicted RBP13.27□□□□□ -0.29
UBXN1-218ENST00000616865 C10orf53Q8N6V4 93 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 STK35Q8TDR2 534 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 KLHL15Q96M94 604 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 ZFP3Q96NJ6 502 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 DACH2Q96NX9 599 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 SFXN3Q9BWM7 321 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 RBM24Q9BX46 236 aaKnown RBP13.27□□□□□ -0.29
UBXN1-218ENST00000616865 ANKRD19PQ9H560 264 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 KRCC1Q9NPI7 259 aaPredicted RBP13.27□□□□□ -0.29
UBXN1-218ENST00000616865 GALNT8Q9NY28 637 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 DNAJB9Q9UBS3 223 aa13.27□□□□□ -0.29
UBXN1-218ENST00000616865 SAMHD1Q9Y3Z3 626 aaKnown RBP13.27□□□□□ -0.29
UBXN1-218ENST00000616865 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
UBXN1-218ENST00000616865 A0A1W2PRQ8 180 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 SH3D21A4FU49 640 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 KPNA4O00629 521 aaPredicted RBP13.26□□□□□ -0.29
UBXN1-218ENST00000616865 CLOCKO15516 846 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 HEXAP06865 529 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 GTF2E2P29084 291 aaKnown RBP13.26□□□□□ -0.29
UBXN1-218ENST00000616865 IDUAP35475 653 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 RBM34P42696 430 aaKnown RBP13.26□□□□□ -0.29
UBXN1-218ENST00000616865 NKX6-1P78426 367 aaPredicted RBP13.26□□□□□ -0.29
UBXN1-218ENST00000616865 DGCR6Q14129 220 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 SGCBQ16585 318 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 SHEQ5VZ18 495 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 HBMQ6B0K9 141 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 PPP4R4Q6NUP7 873 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 CLEC9AQ6UXN8 241 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 LUZP2Q86TE4 346 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 P3H2Q8IVL5 708 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 NKAIN4Q8IVV8 208 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 CDK20Q8IZL9 346 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 TMEM255BQ8WV15 326 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 TMEM239Q8WW34 195 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 TUBA1CQ9BQE3 449 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 TMEM43Q9BTV4 400 aa13.26□□□□□ -0.29
UBXN1-218ENST00000616865 TAPBPLQ9BX59 468 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms