RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 HEXBP07686 556 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 TRAPPC2P0DI81 140 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 TRAPPC2BP0DI82 140 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 F8A1P23610 371 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 APEX1P27695 318 aaKnown RBP17.42■□□□□ 0.38
MMP28-204ENST00000615136 CAPZA2P47755 286 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 TAS2R43P59537 309 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 TRAM1Q15629 374 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.42■□□□□ 0.38
MMP28-204ENST00000615136 RSBN1Q5VWQ0 802 aaPredicted RBP17.42■□□□□ 0.38
MMP28-204ENST00000615136 TCEAL6Q6IPX3 200 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 NFAM1Q8NET5 270 aaPredicted RBP17.42■□□□□ 0.38
MMP28-204ENST00000615136 TCEAL3Q969E4 200 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 MOGAT1Q96PD6 335 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 ERMAPQ96PL5 475 aaPredicted RBP17.42■□□□□ 0.38
MMP28-204ENST00000615136 EXOSC3Q9NQT5 275 aaKnown RBP17.42■□□□□ 0.38
MMP28-204ENST00000615136 CHRNA9Q9UGM1 479 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 ADAM30Q9UKF2 790 aa17.42■□□□□ 0.38
MMP28-204ENST00000615136 LINC00854A0A1B0GVQ3 168 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 ELOA3DA6NLF2 546 aaPredicted RBP17.41■□□□□ 0.38
MMP28-204ENST00000615136 HCRTR2O43614 444 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 MRPL3P09001 348 aaKnown RBP17.41■□□□□ 0.38
MMP28-204ENST00000615136 ACTC1P68032 377 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 ACTA1P68133 377 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 RNF4P78317 190 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 DCDP81605 110 aaKnown RBP17.41■□□□□ 0.38
MMP28-204ENST00000615136 ZNF85Q03923 595 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 POU4F2Q12837 409 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 ELOA3BQ3SY89 546 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 LCN1P1Q5VSP4 162 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 NR2C2APQ86WQ0 139 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 SDR9C7Q8NEX9 313 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 ELOA3Q8NG57 546 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 OR4K13Q8NH42 304 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 DNAJA3Q96EY1 480 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 GFM1Q96RP9 751 aaKnown RBP17.41■□□□□ 0.38
MMP28-204ENST00000615136 ZNF221Q9UK13 617 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 MRTO4Q9UKD2 239 aaKnown RBP17.41■□□□□ 0.38
MMP28-204ENST00000615136 IER3IP1Q9Y5U9 82 aa17.41■□□□□ 0.38
MMP28-204ENST00000615136 MEIOCA2RUB1 952 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 C4orf47A7E2U8 309 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 YKT6O15498 198 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 SLC19A2O60779 497 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 ALOX12BO75342 701 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 IFNGP01579 166 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 HIST1H1CP16403 213 aaKnown RBP17.4■□□□□ 0.38
MMP28-204ENST00000615136 ZNF28P17035 718 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 SLC16A1P53985 500 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 P2RY14Q15391 338 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 OVCH1Q7RTY7 1134 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 PPP1R3BQ86XI6 285 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 GHDCQ8N2G8 530 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 Q8N402 240 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 OR52E2Q8NGJ4 325 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 MOSPD2Q8NHP6 518 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 PMEPA1Q969W9 287 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 C8orf44Q96CB5 159 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 WDR77Q9BQA1 342 aaPredicted RBP17.4■□□□□ 0.38
MMP28-204ENST00000615136 MMP28Q9H239 520 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 PCDHGB7Q9Y5F8 929 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 B4DXG7 233 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 E9PI62 339 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 ADAM10O14672 748 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 OR7A10O76100 309 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 NDUFB2O95178 105 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 SLC2A2P11168 524 aaPredicted RBP17.4■□□□□ 0.38
MMP28-204ENST00000615136 TACR3P29371 465 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 LTBQ06643 244 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 HBMQ6B0K9 141 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 SLC23A3Q6PIS1 610 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 VASH1Q7L8A9 365 aaPredicted RBP17.4■□□□□ 0.38
MMP28-204ENST00000615136 DTWD2Q8NBA8 298 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 NLGN4YQ8NFZ3 816 aaPredicted RBP17.4■□□□□ 0.38
MMP28-204ENST00000615136 SMPDL3BQ92485 455 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 ZC3HAV1LQ96H79 300 aaKnown RBP17.4■□□□□ 0.38
MMP28-204ENST00000615136 C4orf36Q96KX1 117 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 UBL7Q96S82 380 aaPredicted RBP17.4■□□□□ 0.38
MMP28-204ENST00000615136 SPSB2Q99619 263 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 LAT2Q9GZY6 243 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 B3GAT2Q9NPZ5 323 aa17.4■□□□□ 0.38
MMP28-204ENST00000615136 OR6C76A6NM76 312 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 ALG1L2C9J202 215 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 D6RAR5 112 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 NDUFB5O43674 189 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 SCO2O43819 266 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 SC5DO75845 299 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 CER1O95813 267 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 KRT8P05787 483 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 DDOSTP39656 456 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 NKX2-5P52952 324 aaPredicted RBP17.39■□□□□ 0.37
MMP28-204ENST00000615136 ATAD3CQ5T2N8 411 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 TRIQKQ629K1 86 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 ARL9Q6T311 187 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 ZNF563Q8TA94 476 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 ZPLD1Q8TCW7 415 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 ZNRF4Q8WWF5 429 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 KTI12Q96EK9 354 aaPredicted RBP17.39■□□□□ 0.37
MMP28-204ENST00000615136 SEMA4CQ9C0C4 833 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 NEK6Q9HC98 313 aa17.39■□□□□ 0.37
MMP28-204ENST00000615136 VSTM2BA6NLU5 285 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms