RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 NCK1P16333 377 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 LTBQ06643 244 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 SFRP5Q5T4F7 317 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 FAM69AQ5T7M9 428 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 TMEM225Q6GV28 225 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 CASP12Q6UXS9 341 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 LINC00114Q6XXX2 140 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 DEF8Q6ZN54 512 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 FITM2Q8N6M3 262 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 ANKS4BQ8N8V4 417 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 OR9K2Q8NGE7 335 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 APH1AQ96BI3 265 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 S100PBPQ96BU1 408 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 PCDHAC1Q9H158 963 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 LIME1Q9H400 295 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 ADAM21Q9UKJ8 722 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 SLC7A7Q9UM01 511 aa14.79□□□□□ -0.04
CBWD3-211ENST00000615061 TRAV36DV7A0A075B6V5 113 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 M0R082 166 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 CASKO14936 926 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 CHP2O43745 196 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 HRGP04196 525 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 IGHV1-2P23083 117 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 GRPRP30550 384 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 FOXG1P55316 489 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 FOXD4Q12950 439 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 SWT1Q5T5J6 900 aaKnown RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 FBXW10Q5XX13 1052 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 ALKBH2Q6NS38 261 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 VTCN1Q7Z7D3 282 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 CDC20BQ86Y33 519 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 FAM156AQ8NDB6 213 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 ZNF417Q8TAU3 575 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 MOGAT1Q96PD6 335 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 ZNF587Q96SQ5 575 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 KCTD14Q9BQ13 255 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 SPAG4Q9NPE6 437 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 EGFL7Q9UHF1 273 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 TAGLN3Q9UI15 199 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 GPR52Q9Y2T5 361 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 TEP1Q99973 2627 aaKnown RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 TRAPPC13A5PLN9 417 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 DEFB108AA8MXU0 73 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 GSTA4O15217 222 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 IFNA14P01570 189 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 GTF2E2P29084 291 aaKnown RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 SELENOWP63302 87 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 SLC25A3Q00325 362 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 ITGADQ13349 1161 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 PIN1Q13526 163 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 GKAP1Q5VSY0 366 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 FBXW9Q5XUX1 488 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 UBE2J2Q8N2K1 259 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 SF3B5Q9BWJ5 86 aaKnown RBP14.78□□□□□ -0.04
CBWD3-211ENST00000615061 FANCFQ9NPI8 374 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 ZNF226Q9NYT6 803 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 ADA2Q9NZK5 511 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 B3GAT1Q9P2W7 334 aa14.78□□□□□ -0.04
CBWD3-211ENST00000615061 OR2T1O43869 369 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 FZD7O75084 574 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 BGLAPP02818 100 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 FUT4P22083 530 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 CRYGSP22914 178 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 C5orf46Q6UWT4 87 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 CREB3L2Q70SY1 520 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 EPHX4Q8IUS5 362 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 KISS1RQ969F8 398 aaPredicted RBP14.77□□□□□ -0.05
CBWD3-211ENST00000615061 SLC41A3Q96GZ6 507 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 PRSS27Q9BQR3 290 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 TMEM43Q9BTV4 400 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 SNX13Q9Y5W8 968 aa14.77□□□□□ -0.05
CBWD3-211ENST00000615061 ARID1AO14497 2285 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 KPNA4O00629 521 aaPredicted RBP14.76□□□□□ -0.05
CBWD3-211ENST00000615061 ZNF682O95780 498 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 SERPINA1P01009 418 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 IL32P24001 234 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 FAPQ12884 760 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 P2RY6Q15077 328 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 TSPO2Q5TGU0 170 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 C9orf135Q5VTT2 229 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 WFDC8Q8IUA0 241 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 NKAIN4Q8IVV8 208 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 RBM15BQ8NDT2 890 aaKnown RBP14.76□□□□□ -0.05
CBWD3-211ENST00000615061 HS3ST6Q96QI5 342 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 EPYCQ99645 322 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 SLC7A10Q9NS82 523 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 ITPR3Q14573 2671 aa14.76□□□□□ -0.05
CBWD3-211ENST00000615061 HEATR1Q9H583 2144 aaKnown RBP14.76□□□□□ -0.05
CBWD3-211ENST00000615061 VAMP5O95183 116 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 GGT1P19440 569 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 TCN1P20061 433 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 COX5AP20674 150 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 MSX2P35548 267 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 SELENOPP49908 381 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 TAS2R41P59536 307 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 LGALS3BPQ08380 585 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 TAB1Q15750 504 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 CBLL1Q75N03 491 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 BHLHA15Q7RTS1 189 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 AAED1Q7RTV5 226 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms