RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 HNRNPCL4P0DMR1 293 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 CTSEP14091 401 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ATF1P18846 271 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 GMFBP60983 142 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ACSM3Q53FZ2 586 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 CCDC157Q569K6 752 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 SLC25A25Q6KCM7 469 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 NIPAL3Q6P499 406 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 MMP21Q8N119 569 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 PXT1Q8NFP0 134 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ACOT11Q8WXI4 607 aaPredicted RBP20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ARHGDIGQ99819 225 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ARL6Q9H0F7 186 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 IL21RQ9HBE5 538 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 CNIH4Q9P003 139 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ZNF69Q9UC07 566 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 RCE1Q9Y256 329 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 POM121CA8CG34 1229 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 FLRT2O43155 660 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 PRAMEF2O60811 474 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 CH25HO95992 272 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 RAD52P43351 418 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 ZNF311Q5JNZ3 666 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 FAM27D1Q5T7N8 215 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 ZNF660Q6AZW8 331 aaPredicted RBP20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 OVCH1Q7RTY7 1134 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 CPOQ8IVL8 374 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 NSMAFQ92636 917 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 DIO2Q92813 273 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 TM4SF18Q96CE8 201 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 SEC22CQ9BRL7 303 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 GAREM1Q9H706 876 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 EXOSC3Q9NQT5 275 aaKnown RBP20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 CTPS2Q9NRF8 586 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 KLHL9Q9P2J3 617 aa20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 NOSIPQ9Y314 301 aaKnown RBP20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 PCDHGA9Q9Y5G4 932 aaKnown RBP20.16■□□□□ 0.82
POLR2J3-220ENST00000613744 FAM74A7A6NL05 159 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 ARL6IP5O75915 188 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 SNRPBP14678 240 aaKnown RBP20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 ARFIP1P53367 373 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 HSPB3Q12988 150 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 IL10RAQ13651 578 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 FAM74A3Q4VXF1 159 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 PAQR7Q86WK9 346 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 KRT78Q8N1N4 520 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 LRRC61Q9BV99 259 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 AUNIPQ9H7T9 357 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 CAPN10Q9HC96 672 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 BIN3Q9NQY0 253 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 NTMQ9P121 344 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 CACNA1EQ15878 2313 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 KRT33AO76009 404 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 CBX7O95931 251 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 ACTR1BP42025 376 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 ACTR1AP61163 376 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 MAT1AQ00266 395 aaKnown RBP20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 DMKNQ6E0U4 476 aaPredicted RBP20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 RAB11FIP2Q7L804 512 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 LMX1AQ8TE12 382 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 XAGE5Q8WWM1 108 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 PGLYRP3Q96LB9 341 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 EPHA6Q9UF33 1036 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 MLXQ9UH92 298 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 OPN4Q9UHM6 478 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 MUC6Q6W4X9 2439 aa20.15■□□□□ 0.82
POLR2J3-220ENST00000613744 ARPC5O15511 151 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 UBBP0CG47 229 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 UBCP0CG48 685 aaKnown RBP20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 NME1P15531 152 aaKnown RBP20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 RPA2P15927 270 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 BUD31P41223 144 aaPredicted RBP20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 RPS27AP62979 156 aaKnown RBP20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 UBA52P62987 128 aaKnown RBP20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 MPPED2Q15777 294 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 HLA-BQ31612 363 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 METRNLQ641Q3 311 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 NRROSQ86YC3 692 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 TMEM99Q8N816 258 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 OR8K3Q8NH51 312 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 BRIX1Q8TDN6 353 aaKnown RBP20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 C15orf40Q8WUR7 153 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 LOXL4Q96JB6 756 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 TIMM29Q9BSF4 260 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 KRCC1Q9NPI7 259 aaPredicted RBP20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 UBE2QL1A1L167 161 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 KDM4BO94953 1096 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 C1orf105O95561 183 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 BLKP51451 505 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 SLC23A3Q6PIS1 610 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 UQCC3Q6UW78 93 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 TAF8Q7Z7C8 310 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 SFTPA2Q8IWL1 248 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 CCDC36Q8IYA8 594 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 ELF4Q99607 663 aaPredicted RBP20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 OR52A5Q9H2C5 316 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 DPEP2Q9H4A9 486 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 SH2B3Q9UQQ2 575 aa20.14■□□□□ 0.81
POLR2J3-220ENST00000613744 TRBV23OR9-2A0A075B6M9 112 aa20.13■□□□□ 0.81
POLR2J3-220ENST00000613744 ANKRD20A5PA0PJZ0 165 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms