RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 BOD1Q96IK1 185 aa16.01■□□□□ 0.15
VCX3A-203ENST00000612369 CGREF1Q99674 301 aa16.01■□□□□ 0.15
VCX3A-203ENST00000612369 RSPO3Q9BXY4 272 aaPredicted RBP16.01■□□□□ 0.15
VCX3A-203ENST00000612369 GRIP2Q9C0E4 1043 aa16.01■□□□□ 0.15
VCX3A-203ENST00000612369 GSX1Q9H4S2 264 aaPredicted RBP16.01■□□□□ 0.15
VCX3A-203ENST00000612369 FAIMQ9NVQ4 179 aa16.01■□□□□ 0.15
VCX3A-203ENST00000612369 NPAP1Q9NZP6 1156 aa16.01■□□□□ 0.15
VCX3A-203ENST00000612369 AMDHD2Q9Y303 409 aa16.01■□□□□ 0.15
VCX3A-203ENST00000612369 MAGED1Q9Y5V3 778 aaPredicted RBP16.01■□□□□ 0.15
VCX3A-203ENST00000612369 A0A1B0GWA3 101 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 OVOL3O00110 214 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 ABCD4O14678 606 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 TPST1O60507 370 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 GTF2E2P29084 291 aaKnown RBP16■□□□□ 0.15
VCX3A-203ENST00000612369 RGS8P57771 180 aaPredicted RBP16■□□□□ 0.15
VCX3A-203ENST00000612369 ALG10BQ5I7T1 473 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 FAM69AQ5T7M9 428 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 SLC30A8Q8IWU4 369 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 SLC38A4Q969I6 547 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 SLC47A1Q96FL8 570 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 TRMT61AQ96FX7 289 aaKnown RBP16■□□□□ 0.15
VCX3A-203ENST00000612369 COX4I2Q96KJ9 171 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 PTDSS2Q9BVG9 487 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 TMEM27Q9HBJ8 222 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 CISD1Q9NZ45 108 aaKnown RBP16■□□□□ 0.15
VCX3A-203ENST00000612369 SELENONQ9NZV5 590 aa16■□□□□ 0.15
VCX3A-203ENST00000612369 NIPBLQ6KC79 2804 aaeCLIP15.99■□□□□ 0.15
VCX3A-203ENST00000612369 SHISA9B4DS77 424 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 MFN2O95140 757 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 TROVE2P10155 538 aaKnown RBP eCLIP15.99■□□□□ 0.15
VCX3A-203ENST00000612369 PAX7P23759 505 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 HTR2AP28223 471 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 RPS5P46782 204 aaKnown RBP15.99■□□□□ 0.15
VCX3A-203ENST00000612369 FOXG1P55316 489 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-203ENST00000612369 ATP5J2P56134 94 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 PCBP3P57721 371 aaKnown RBP15.99■□□□□ 0.15
VCX3A-203ENST00000612369 NFYCQ13952 458 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 MFSD13AQ14CX5 517 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 ETFDHQ16134 617 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 CYP51A1Q16850 503 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 GLIPR1L2Q4G1C9 344 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 RETREG3Q86VR2 466 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 COMTD1Q86VU5 262 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 RANBP3LQ86VV4 465 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-203ENST00000612369 DEPDC4Q8N2C3 294 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 OR6S1Q8NH40 331 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 NEUROG1Q92886 237 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 SLC25A36Q96CQ1 311 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 KTI12Q96EK9 354 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-203ENST00000612369 SLC17A5Q9NRA2 495 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 B3GALT5Q9Y2C3 310 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 USF3Q68DE3 2245 aa15.99■□□□□ 0.15
VCX3A-203ENST00000612369 TRAV36DV7A0A075B6V5 113 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 AIM2O14862 343 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 KRT33AO76009 404 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 C8BP07358 591 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 SOD3P08294 240 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 ZNF43P17038 809 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 CD40P25942 277 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 AQP1P29972 269 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 ZNF83P51522 516 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 CDH11P55287 796 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 MTPNP58546 118 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 PRPS1P60891 318 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 PGGHGQ32M88 737 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 SWT1Q5T5J6 900 aaKnown RBP15.98■□□□□ 0.15
VCX3A-203ENST00000612369 LSRQ86X29 649 aaPredicted RBP15.98■□□□□ 0.15
VCX3A-203ENST00000612369 PTOV1Q86YD1 416 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 EPHX4Q8IUS5 362 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 WDR31Q8NA23 367 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 OXGR1Q96P68 337 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 ZNF317Q96PQ6 595 aaPredicted RBP15.98■□□□□ 0.15
VCX3A-203ENST00000612369 EPYCQ99645 322 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 TMEM120AQ9BXJ8 343 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 LINC00470Q9BZP3 86 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 ALG2Q9H553 416 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 KAT8Q9H7Z6 458 aaKnown RBP15.98■□□□□ 0.15
VCX3A-203ENST00000612369 OBP2BQ9NPH6 170 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 RCE1Q9Y256 329 aa15.98■□□□□ 0.15
VCX3A-203ENST00000612369 A0A087WUJ7 227 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 A0A0B4J2E0 115 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 LOC102725191A0A1B0GVB3 256 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 A0A1B0GX12 115 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 ZNF587BE7ETH6 402 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 H7C1Q1 480 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 FMO6PO60774 539 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 WNT11O96014 354 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 DMTNQ08495 405 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 OR1Q1Q15612 314 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 INTS11Q5TA45 600 aaKnown RBP15.97■□□□□ 0.15
VCX3A-203ENST00000612369 C9orf135Q5VTT2 229 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 AGAP6Q5VW22 663 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 KLHL24Q6TFL4 600 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 PATL1Q86TB9 770 aaKnown RBP15.97■□□□□ 0.15
VCX3A-203ENST00000612369 DTX2Q86UW9 622 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 PIAS4Q8N2W9 510 aaPredicted RBP15.97■□□□□ 0.15
VCX3A-203ENST00000612369 ADPRHL1Q8NDY3 354 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 ANKK1Q8NFD2 765 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 TAAR8Q969N4 342 aa15.97■□□□□ 0.15
VCX3A-203ENST00000612369 GTPBP3Q969Y2 492 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms