RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 RNF212BA8MTL3 300 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 HNRNPCL2B2RXH8 293 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 HNRNPCL3B7ZW38 293 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 ZNF587BE7ETH6 402 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 KLF11O14901 512 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 HNRNPCL1O60812 293 aaKnown RBP15.51■□□□□ 0.07
SSBP1-215ENST00000612337 NPIPB7O75200 414 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 KRT33AO76009 404 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 F12P00748 615 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-215ENST00000612337 HNRNPCL4P0DMR1 293 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 PRG2P13727 222 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 NCF2P19878 526 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-215ENST00000612337 PAX7P23759 505 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 SELENOPP49908 381 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 MST1LQ2TV78 715 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 TBRG1Q3YBR2 411 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 RPS26P11Q5JNZ5 115 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-215ENST00000612337 PRAMEF8Q5VWM4 474 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 PRAMEF7Q5VXH5 474 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 ATG16L1Q676U5 607 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 CREB3L2Q70SY1 520 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 OR1K1Q8NGR3 316 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 STK35Q8TDR2 534 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 NANOS1Q8WY41 292 aaKnown RBP15.51■□□□□ 0.07
SSBP1-215ENST00000612337 C3orf49Q96BT1 292 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 TMEM19Q96HH6 336 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 ITCHQ96J02 903 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 SPATA9Q9BWV2 254 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 ARMC7Q9H6L4 198 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 CACYBPQ9HB71 228 aaKnown RBP15.51■□□□□ 0.07
SSBP1-215ENST00000612337 SDR39U1Q9NRG7 319 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-215ENST00000612337 TMEM160Q9NX00 188 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 CDC42EP3Q9UKI2 254 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 ZNF232Q9UNY5 417 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 RASD1Q9Y272 281 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 IFT52Q9Y366 437 aa15.51■□□□□ 0.07
SSBP1-215ENST00000612337 IGHV1-18A0A0C4DH31 117 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 TMEM247A6NEH6 219 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 TMEM229AB2RXF0 380 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 LGI1O95970 557 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 FAM157CP0CG43 387 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 GTDC1Q4AE62 458 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 SLC9B1Q4ZJI4 515 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 SERPINA11Q86U17 422 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 EPHX4Q8IUS5 362 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 MGARPQ8TDB4 240 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 FBXO17Q96EF6 278 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 ZNF317Q96PQ6 595 aaPredicted RBP15.5■□□□□ 0.07
SSBP1-215ENST00000612337 SLC38A2Q96QD8 506 aa15.5■□□□□ 0.07
SSBP1-215ENST00000612337 ARPC4-TTLL3A0A0A6YYG9 625 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 LY6HO94772 140 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 AHSA1O95433 338 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 USF1P22415 310 aaPredicted RBP15.49■□□□□ 0.07
SSBP1-215ENST00000612337 POLR2JP52435 117 aaKnown RBP15.49■□□□□ 0.07
SSBP1-215ENST00000612337 SLC18A1P54219 525 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 UBE2NP61088 152 aaKnown RBP15.49■□□□□ 0.07
SSBP1-215ENST00000612337 LGALS3BPQ08380 585 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 ZNF311Q5JNZ3 666 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 CYB5R2Q6BCY4 276 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 NIPAL3Q6P499 406 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 MAVSQ7Z434 540 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 MFSD8Q8NHS3 518 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 MAGEE2Q8TD90 523 aaPredicted RBP15.49■□□□□ 0.07
SSBP1-215ENST00000612337 BCL2L2Q92843 193 aaPredicted RBP15.49■□□□□ 0.07
SSBP1-215ENST00000612337 SLC35B4Q969S0 331 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 VPS33AQ96AX1 596 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 ALKBH3Q96Q83 286 aaPredicted RBP15.49■□□□□ 0.07
SSBP1-215ENST00000612337 KCNK17Q96T54 332 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 KATNB1Q9BVA0 655 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 CRNNQ9UBG3 495 aaPredicted RBP15.49■□□□□ 0.07
SSBP1-215ENST00000612337 FKBP7Q9Y680 259 aa15.49■□□□□ 0.07
SSBP1-215ENST00000612337 MALRD1Q5VYJ5 2156 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 FTCDNL1E5RQL4 147 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 UBDO15205 165 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 IGHV4-31P0DP07 118 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 SNRPD2P62316 118 aaKnown RBP15.48■□□□□ 0.07
SSBP1-215ENST00000612337 EGR4Q05215 589 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 C3orf36Q3SXR2 165 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 C6orf10Q5SRN2 563 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 LINGO2Q7L985 606 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 PHC2Q8IXK0 858 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 OR9I1Q8NGQ6 314 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 TMEM158Q8WZ71 300 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 OR52B2Q96RD2 323 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 KCNS3Q9BQ31 491 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 LINC00470Q9BZP3 86 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 MOV10Q9HCE1 1003 aaKnown RBP15.48■□□□□ 0.07
SSBP1-215ENST00000612337 BCL2L10Q9HD36 194 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 CA10Q9NS85 328 aa15.48■□□□□ 0.07
SSBP1-215ENST00000612337 VWC2LB2RUY7 222 aa15.47■□□□□ 0.07
SSBP1-215ENST00000612337 NDUFS8O00217 210 aa15.47■□□□□ 0.07
SSBP1-215ENST00000612337 ERLIN1O75477 346 aa15.47■□□□□ 0.07
SSBP1-215ENST00000612337 UPK3AO75631 287 aa15.47■□□□□ 0.07
SSBP1-215ENST00000612337 CRYAAP02489 173 aa15.47■□□□□ 0.07
SSBP1-215ENST00000612337 PNMTP11086 282 aa15.47■□□□□ 0.07
SSBP1-215ENST00000612337 HOXB1P14653 301 aaPredicted RBP15.47■□□□□ 0.07
SSBP1-215ENST00000612337 SERPINF1P36955 418 aa15.47■□□□□ 0.07
SSBP1-215ENST00000612337 PDLIM4P50479 330 aa15.47■□□□□ 0.07
SSBP1-215ENST00000612337 SH3BGRP55822 239 aaPredicted RBP15.47■□□□□ 0.07
SSBP1-215ENST00000612337 LSM11P83369 360 aaKnown RBP eCLIP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms