RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 IDH3GP51553 393 aaPredicted RBP11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 IL1RL1Q01638 556 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 NAAAQ02083 359 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 CR1LQ2VPA4 569 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 LIN52Q52LA3 116 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 C1orf140Q5VVS0 124 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 ZNF440Q8IYI8 595 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 LRRC34Q8IZ02 419 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 KDM8Q8N371 416 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 OR52P1PQ8NH57 321 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 KATNB1Q9BVA0 655 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 SF3B5Q9BWJ5 86 aaKnown RBP11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 MTHFD2LQ9H903 347 aaPredicted RBP11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 DYNLRB1Q9NP97 96 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 KCNK9Q9NPC2 374 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 OBP2BQ9NPH6 170 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 AIG1Q9NVV5 245 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 P2RX2Q9UBL9 471 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 ZNF443Q9Y2A4 671 aaPredicted RBP11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 CDHR4A6H8M9 788 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 hCG_2039718K7EN88 272 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 FAAHO00519 579 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 RFXANKO14593 260 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 UPK3AO75631 287 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 SEC14L2O76054 403 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 ANP32DO95626 131 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 PGRP06401 933 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 CELA3BP08861 270 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 ETFAP13804 333 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 CALCRP30988 508 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 SRP14P37108 136 aaKnown RBP11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 CLDN17P56750 224 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 STX3Q13277 289 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 ADIPOQQ15848 244 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 NXNQ6DKJ4 435 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 WBP2NLQ6ICG8 309 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 CREB3L2Q70SY1 520 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 LINGO2Q7L985 606 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 SPATA21Q7Z572 469 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 ZCCHC24Q8N2G6 241 aaKnown RBP11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 SVOPLQ8N434 492 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 SNX18Q96RF0 628 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 SOX7Q9BT81 388 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 RAB1BQ9H0U4 201 aa11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 V9GYY5 206 aaPredicted RBP11.61□□□□□ -0.55
HMGB1P24-201ENST00000611897 A8MVM7 634 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 B9A039 149 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 SDHDO14521 159 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 BIRC5O15392 142 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 KRT75O95678 551 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 ERCC1P07992 297 aaPredicted RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 KITP10721 976 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 ZNF23P17027 643 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 APEX1P27695 318 aaKnown RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 EPHA3P29320 983 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 RPS5P46782 204 aaKnown RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 MAP2K6P52564 334 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 CRISP3P54108 245 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 DSTNP60981 165 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 HOXC5Q00444 222 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 CCNIQ14094 377 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 LARS2Q15031 903 aaKnown RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 GSTA3Q16772 222 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 GTDC1Q4AE62 458 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 ANKRD16Q6P6B7 361 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 SERPINA11Q86U17 422 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 MYPOPQ86VE0 399 aaPredicted RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 CLIP4Q8N3C7 705 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 ANKRD42Q8N9B4 389 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 AENQ8WTP8 325 aaKnown RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 BCL2L2Q92843 193 aaPredicted RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 ADAM19Q9H013 955 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 TPK1Q9H3S4 243 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 WDR55Q9H6Y2 383 aaPredicted RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 MEAF6Q9HAF1 191 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 MYOZ1Q9NP98 299 aaPredicted RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 SEC14L4Q9UDX3 406 aa11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.6□□□□□ -0.55
HMGB1P24-201ENST00000611897 SVEP1Q4LDE5 3571 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 TMEM247A6NEH6 219 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 OR6C65A6NJZ3 312 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 PNMTP11086 282 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 DAOP14920 347 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 CBLP22681 906 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 THBS4P35443 961 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 ACAA2P42765 397 aaKnown RBP11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 P2RY4P51582 365 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 TXNL4AP83876 142 aaKnown RBP11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 ARF1P84077 181 aaKnown RBP11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 BST1Q10588 318 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 SNTB2Q13425 540 aaKnown RBP11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 C1DQ13901 141 aaKnown RBP11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 MAPK11Q15759 364 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 C6orf10Q5SRN2 563 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 LIPNQ5VXI9 398 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 AP1ARQ63HQ0 302 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 OGFOD2Q6N063 350 aa11.59□□□□□ -0.55
HMGB1P24-201ENST00000611897 RINLQ6ZS11 566 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms