RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 MED20Q9H944 212 aa10.98□□□□□ -0.65
TP53-220ENST00000610623 ZCCHC3Q9NUD5 404 aaKnown RBP10.98□□□□□ -0.65
TP53-220ENST00000610623 HAO2Q9NYQ3 351 aa10.98□□□□□ -0.65
TP53-220ENST00000610623 CD84Q9UIB8 345 aa10.98□□□□□ -0.65
TP53-220ENST00000610623 PCDHB10Q9UN67 800 aa10.98□□□□□ -0.65
TP53-220ENST00000610623 MEX3AA1L020 520 aaKnown RBP10.97□□□□□ -0.65
TP53-220ENST00000610623 FAM86C2PA6NEL3 165 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 IMPA2O14732 288 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 TSPAN6O43657 245 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 EPCAMP16422 314 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 TRHRP34981 398 aaPredicted RBP10.97□□□□□ -0.65
TP53-220ENST00000610623 PTGFRP43088 359 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 STXBP1P61764 594 aaKnown RBP10.97□□□□□ -0.65
TP53-220ENST00000610623 PPP2CBP62714 309 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 PPP2CAP67775 309 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 FUT5Q11128 374 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 ECH1Q13011 328 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 JMJD6Q6NYC1 403 aaPredicted RBP10.97□□□□□ -0.65
TP53-220ENST00000610623 FCRLAQ7L513 359 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 OLIG3Q7RTU3 272 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 HMGN2P46Q86SG4 172 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 C12orf40Q86WS4 652 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 LNX2Q8N448 690 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 RXFP4Q8TDU9 374 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 CXorf40AQ8TE69 158 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 ZNF707Q96C28 371 aaPredicted RBP10.97□□□□□ -0.65
TP53-220ENST00000610623 HAVCR1Q96D42 359 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 MRGPRX3Q96LB0 322 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 OR52D1Q9H346 318 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 ADGRL4Q9HBW9 690 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 TMEM138Q9NPI0 162 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 KLHL28Q9NXS3 571 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 TAS2R8Q9NYW2 309 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 MKL2Q9ULH7 1088 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 WNT6Q9Y6F9 365 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 TRAV14DV4A0A0A6YYC5 116 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 LINC01553A4QN01 128 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 BHLHE40O14503 412 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 CDC42EP2O14613 210 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 SCAMP1O15126 338 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 BCL2L11O43521 198 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 NTN1O95631 604 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 ZGLP1P0C6A0 271 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 ADCYAP1P18509 176 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 SRMP19623 302 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 BSGP35613 385 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 BLOC1S1P78537 153 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 CDK5R1Q15078 307 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 C2orf27AQ580R0 203 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 KHDRBS2Q5VWX1 349 aaKnown RBP10.97□□□□□ -0.65
TP53-220ENST00000610623 UNQ9370/PRO34162Q6UXP9 181 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 SLC16A13Q7RTY0 426 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 ZNF740Q8NDX6 193 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 OR6N1Q8NGY5 312 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 SMPDL3BQ92485 455 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 SLC25A28Q96A46 364 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 HCAR1Q9BXC0 346 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 ALX4Q9H161 411 aaPredicted RBP10.97□□□□□ -0.65
TP53-220ENST00000610623 MTIF3Q9H2K0 278 aaKnown RBP10.97□□□□□ -0.65
TP53-220ENST00000610623 NIT2Q9NQR4 276 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 CMC2Q9NRP2 79 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 SLC22A11Q9NSA0 550 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 C5AR2Q9P296 337 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 IL36AQ9UHA7 158 aa10.97□□□□□ -0.65
TP53-220ENST00000610623 WRBO00258 174 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 UBE2CO00762 179 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 CD8AP01732 235 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 RLN1P04808 185 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 CALCBP10092 127 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 CEBPBP17676 345 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 BMP7P18075 431 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 LUMP51884 338 aaPredicted RBP10.96□□□□□ -0.65
TP53-220ENST00000610623 HCCSP53701 268 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 RPS11P62280 158 aaKnown RBP eCLIP10.96□□□□□ -0.65
TP53-220ENST00000610623 POU4F2Q12837 409 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 PDZK1IP1Q13113 114 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 HES5Q5TA89 166 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 H3F3CQ6NXT2 135 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 DPPA4Q7L190 304 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 GDF7Q7Z4P5 450 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 GRASPQ7Z6J2 395 aaPredicted RBP10.96□□□□□ -0.65
TP53-220ENST00000610623 TRAM1L1Q8N609 369 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 OR1S2Q8NGQ3 325 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 SYNPRQ8TBG9 265 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 SLC41A3Q96GZ6 507 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 TMEM185BQ9H7F4 350 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 RNF122Q9H9V4 155 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 GPR55Q9Y2T6 319 aaPredicted RBP10.96□□□□□ -0.65
TP53-220ENST00000610623 PLXND1Q9Y4D7 1925 aa10.96□□□□□ -0.65
TP53-220ENST00000610623 TMEM272A0A1B0GTI8 110 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 UNC119BA6NIH7 251 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 FRS3O43559 492 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 RDH16O75452 317 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 LEFTY1O75610 366 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 RBBP9O75884 186 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 HTR3BO95264 441 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 BDKRB2P30411 391 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 SLC16A1P53985 500 aa10.96□□□□□ -0.66
TP53-220ENST00000610623 SNRPEP62304 92 aaKnown RBP10.96□□□□□ -0.66
TP53-220ENST00000610623 NTHL1P78549 312 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms