RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 NINJ1Q92982 152 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 SLC38A4Q969I6 547 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 ARHGDIGQ99819 225 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 NPAP1Q9NZP6 1156 aa12.77□□□□□ -0.37
HDDC2-204ENST00000608295 A0A0B4J2E0 115 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 A0A1B0GX12 115 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 FTCDNL1E5RQL4 147 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 COX4I1P13073 169 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 NQO1P15559 274 aaKnown RBP12.76□□□□□ -0.37
HDDC2-204ENST00000608295 NUDT2P50583 147 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 ZNF83P51522 516 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 MAP2K6P52564 334 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 GNGT1P63211 74 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 BSPH1Q075Z2 132 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 SPOCK1Q08629 439 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 PPA1Q15181 289 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 NRF1Q16656 503 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 ENTPD8Q5MY95 495 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 INTS11Q5TA45 600 aaKnown RBP12.76□□□□□ -0.37
HDDC2-204ENST00000608295 CARD17Q5XLA6 110 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 ULK3Q6PHR2 472 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 WDR88Q6ZMY6 472 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 PATL1Q86TB9 770 aaKnown RBP12.76□□□□□ -0.37
HDDC2-204ENST00000608295 CALHM3Q86XJ0 350 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 TREML1Q86YW5 311 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 ZIC4Q8N9L1 334 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 OR8J3Q8NGG0 315 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 MFSD8Q8NHS3 518 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 AKAP1Q92667 903 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDDC2-204ENST00000608295 SLC35B4Q969S0 331 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 SLC47A1Q96FL8 570 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 PERPQ96FX8 193 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 MOGAT1Q96PD6 335 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 GID8Q9NWU2 228 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 MALT1Q9UDY8 824 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 SLC7A7Q9UM01 511 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 EDARQ9UNE0 448 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 SH3GLB1Q9Y371 365 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 RNF115Q9Y4L5 304 aa12.76□□□□□ -0.37
HDDC2-204ENST00000608295 TRAV36DV7A0A075B6V5 113 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 FAM220BPB1ANY3 271 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 SEC14L2O76054 403 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 LGI1O95970 557 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 CADP27708 2225 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 SLC7A2P52569 658 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 NR1H2P55055 460 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 CLDN17P56750 224 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 SLC25A3Q00325 362 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 C1DQ13901 141 aaKnown RBP12.75□□□□□ -0.37
HDDC2-204ENST00000608295 ACKR1Q16570 336 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 FAM69AQ5T7M9 428 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 C6orf89Q6UWU4 347 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 SEZ6L2Q6UXD5 910 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 CARM1Q86X55 608 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 EPHX4Q8IUS5 362 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 SLC30A8Q8IWU4 369 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 LSMEM1Q8N8F7 131 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 WFDC11Q8NEX6 87 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 BHLHE22Q8NFJ8 381 aaPredicted RBP12.75□□□□□ -0.37
HDDC2-204ENST00000608295 OR2T12Q8NG77 320 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 DNAJA4Q8WW22 397 aaPredicted RBP12.75□□□□□ -0.37
HDDC2-204ENST00000608295 PROX1Q92786 737 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 MUCL1Q96DR8 90 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 TPD52L3Q96J77 140 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 FOXC2Q99958 501 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 SH3GL1Q99961 368 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 HDHD5Q9BXW7 423 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 OR10A4Q9H209 315 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 SLCO5A1Q9H2Y9 848 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 CMTM6Q9NX76 183 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 TAS2R16Q9NYV7 291 aa12.75□□□□□ -0.37
HDDC2-204ENST00000608295 A0A087WUJ7 227 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 OR5H1A6NKK0 313 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 M0R1B8 84 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 ATP8B1O43520 1251 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 THY1P04216 161 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 CD3EP07766 207 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 HLA-DOBP13765 273 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 LSP1P33241 339 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 OR1E2P47887 323 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 TUBA1BP68363 451 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 TUBA4AP68366 448 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 HIKESHIQ53FT3 197 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 COQ5Q5HYK3 327 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 CREB3L2Q70SY1 520 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 TUBA1AQ71U36 451 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 LINGO2Q7L985 606 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 MICU2Q8IYU8 434 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 ADAMTS16Q8TE57 1224 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 HSD17B8Q92506 261 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 TMEM45BQ96B21 275 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 ZNF583Q96ND8 569 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 ALPK1Q96QP1 1244 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
HDDC2-204ENST00000608295 ESRP2Q9H6T0 727 aaKnown RBP12.74□□□□□ -0.37
HDDC2-204ENST00000608295 MRGBPQ9NV56 204 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 PARPBPQ9NWS1 579 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 RASD1Q9Y272 281 aa12.74□□□□□ -0.37
HDDC2-204ENST00000608295 HIVEP1P15822 2718 aa12.73□□□□□ -0.37
HDDC2-204ENST00000608295 DPRXA6NFQ7 191 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms