RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PRR23D2P0DMB1 279 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 COX5BP10606 129 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CBR1P16152 277 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 EPORP19235 508 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CELP19835 753 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 LPOP22079 712 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 LMO2P25791 158 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ELAVL4P26378 380 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 AOAHP28039 575 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SHC1P29353 583 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CRABP1P29762 137 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 HTR1FP30939 366 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CD86P42081 329 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 GLP1RP43220 463 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAD52P43351 418 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MAPK9P45984 424 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SUCLG1P53597 346 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PNLIPRP2P54317 469 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 NUTF2P61970 127 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAB1AP62820 205 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 BLOC1S1P78537 153 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAM189BP81408 668 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 NHLH2Q02577 135 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 HGFACQ04756 655 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CNTN1Q12860 1018 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 NFATC2Q13469 925 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ALKBH1Q13686 389 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SCARB2Q14108 478 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PPA1Q15181 289 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PTPRRQ15256 657 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 INPP5JQ15735 1006 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZSWIM7Q19AV6 140 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MPPE1Q53F39 396 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RNASE10Q5GAN6 216 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 VWA2Q5GFL6 755 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CTSL3PQ5NE16 218 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CPTPQ5TA50 214 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 FNDC7Q5VTL7 733 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 LIPJQ5W064 366 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CYB5RLQ6IPT4 315 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ADNP2Q6IQ32 1131 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 REEP3Q6NUK4 255 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ACSM5Q6NUN0 579 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CDC73Q6P1J9 531 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMEM88Q6PEY1 159 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAM83HQ6ZRV2 1179 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 NDUFAF7Q7L592 441 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 C6orf120Q7Z4R8 191 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MRPL52Q86TS9 123 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF546Q86UE3 836 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CBLN2Q8IUK8 224 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CPXCR1Q8N123 301 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TMEM86AQ8N2M4 240 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 LNX2Q8N448 690 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLC30A7Q8NEW0 376 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR9A4Q8NGU2 314 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR6N1Q8NGY5 312 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR52J3Q8NH60 311 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 AKR7LQ8NHP1 331 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 BBS10Q8TAM1 723 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TRMT10AQ8TBZ6 339 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 BRIX1Q8TDN6 353 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 FCAMRQ8WWV6 532 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAB40AQ8WXH6 277 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CFHR4Q92496 578 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ARL11Q969Q4 196 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 HIST1H2BAQ96A08 127 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ESAMQ96AP7 390 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 R3HDM4Q96D70 268 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MTFMTQ96DP5 389 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RAB3CQ96E17 227 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 LRR1Q96L50 414 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 NOL4LQ96MY1 436 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR5B2Q96R09 309 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 S100A13Q99584 98 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 COPS8Q99627 209 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SSX3Q99909 188 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 WDR77Q9BQA1 342 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MGME1Q9BQP7 344 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 GINS4Q9BRT9 223 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MRPL37Q9BZE1 423 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 GPR61Q9BZJ8 451 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CHST5Q9GZS9 411 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR10A5Q9H207 317 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 PRDM13Q9H4Q3 707 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 XKR8Q9H6D3 395 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ELAC1Q9H777 363 aaKnown RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 MVB12BQ9H7P6 319 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 ZNF703Q9H7S9 590 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SFXN1Q9H9B4 322 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 LMAN1LQ9HAT1 526 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 NT5MQ9NPB1 228 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 KRCC1Q9NPI7 259 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 SLAMF7Q9NQ25 335 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CA10Q9NS85 328 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 CUTCQ9NTM9 273 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TAS2R8Q9NYW2 309 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 TVP23BQ9NYZ1 205 aa3.73□□□□□ -1.81
HMGB1P50-201ENST00000605814 RCC2Q9P258 522 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms