RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 A0A0A6YYD4 124 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 IGLV5-39A0A0G2JS06 123 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 MEX3AA1L020 520 aaKnown RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 NKX6-3A6NJ46 265 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ATP6V0E1O15342 81 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CLOCKO15516 846 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 SYNGR3O43761 229 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 RAMP3O60896 148 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 STX11O75558 287 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 GLUD1P00367 558 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 OAS1P00973 400 aaKnown RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ALOX5P09917 674 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 H2BFMP0C1H6 154 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 FRMD6-AS1P0C7T7 363 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CALM1P0DP23 149 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CALM2P0DP24 149 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CALM3P0DP25 149 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CDH1P12830 882 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CCL2P13500 99 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 KITLGP21583 273 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 STOMP27105 288 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CD1CP29017 333 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 HOXA6P31267 233 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CXCL12P48061 93 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 FUT6P51993 359 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 PLTPP55058 493 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 HERV-K104P61576 105 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CSNK2BP67870 215 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 NTHL1P78549 312 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CDK16Q00536 496 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 Q0VFX4 171 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 GPR176Q14439 515 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 KNOP1Q1ED39 458 aaKnown RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 FAM106AQ4KMX7 169 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 LCN1P1Q5VSP4 162 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 SLC22A10Q63ZE4 541 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ZNF626Q68DY1 528 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CLEC6AQ6EIG7 209 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ATRAIDQ6UW56 229 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 TMEM207Q6UWW9 146 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ZNF730Q6ZMV8 503 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 NKAIN4Q8IVV8 208 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 OR4N5Q8IXE1 308 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ZNF843Q8N446 348 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 OR4A15Q8NGL6 344 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 OR1L3Q8NH93 324 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CNIH3Q8TBE1 160 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 LRRC20Q8TCA0 184 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 MAGEE2Q8TD90 523 aaPredicted RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 DDB2Q92466 427 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 FGF14Q92915 247 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 NTNG2Q96CW9 530 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CERS2Q96G23 380 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 TIMD4Q96H15 378 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 NSMCE3Q96MG7 304 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ZNF578Q96N58 590 aaPredicted RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 MBOAT4Q96T53 435 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 LPAR4Q99677 370 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 P2RY13Q9BPV8 354 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ACBD6Q9BR61 282 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 TMEM175Q9BSA9 504 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 PAPOLGQ9BWT3 736 aaKnown RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 ILKAPQ9H0C8 392 aaPredicted RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 GAL3ST2Q9H3Q3 398 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 PNO1Q9NRX1 252 aaKnown RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 DCAF13Q9NV06 445 aaKnown RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 STX18Q9P2W9 335 aaKnown RBP3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CYTH4Q9UIA0 394 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 RNF24Q9Y225 148 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 CNTNAP2Q9UHC6 1331 aa3.34□□□□□ -1.87
IGHV3-29-201ENST00000604817 WDR81Q562E7 1941 aa3.34□□□□□ -1.88
IGHV3-29-201ENST00000604817 NOTCH4Q99466 2003 aa3.34□□□□□ -1.88
IGHV3-29-201ENST00000604817 ATG2BQ96BY7 2078 aa3.34□□□□□ -1.88
IGHV3-29-201ENST00000604817 ITPR1Q14643 2758 aa3.34□□□□□ -1.88
IGHV3-29-201ENST00000604817 ACACAQ13085 2346 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 NUP205Q92621 2012 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 IGKV6D-21A0A0A0MT36 114 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 LY6G6EA0A0G2JKS1 128 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 A0A0J9YVX5 310 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 LRIT2A6NDA9 550 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 OR5H15A6NDH6 313 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 TUBAL3A6NHL2 446 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 SERPINE3A8MV23 424 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 NR5A2O00482 541 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 SOCS2O14508 198 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 TRAFD1O14545 582 aaPredicted RBP3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 EPHB6O15197 1021 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 SIGLEC5O15389 551 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 HCN1O60741 890 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 NIPSNAP2O75323 286 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 OR2J3O76001 311 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 LRATO95237 230 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 CTDNEP1O95476 244 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 FGF3P11487 239 aaPredicted RBP3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 HOXB2P14652 356 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 ACADSP16219 412 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 HOXB6P17509 224 aaKnown RBP3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 IMPDH1P20839 514 aa3.33□□□□□ -1.88
IGHV3-29-201ENST00000604817 CSRP1P21291 193 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms