RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 NRGNQ92686 78 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 PGLYRP4Q96LB8 373 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 BCL7BQ9BQE9 202 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 C19orf24Q9BVV8 132 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 MFFQ9GZY8 342 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 DNTTIP1Q9H147 329 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 FOLH1BQ9HBA9 442 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 HOXC10Q9NYD6 342 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 DCDC2Q9UHG0 476 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 STAP1Q9ULZ2 295 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 FLVCR1Q9Y5Y0 555 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 CNTNAP2Q9UHC6 1331 aa3.17□□□□□ -1.9
AC004542.1-201ENST00000602955 NCAPD3P42695 1498 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 INSRP06213 1382 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 TOP2AP11388 1531 aaKnown RBP3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 IGKV1D-8A0A087WSZ0 117 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 SRRM5B3KS81 715 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 ZNF354AO60765 605 aaPredicted RBP3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 TBX6O95947 436 aaPredicted RBP3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 UBTFL1P0CB47 393 aaPredicted RBP3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 ZNF883P0CG24 379 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 RBMY1CP0DJD4 496 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 ZNF24P17028 368 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 ZP3P21754 424 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 SHMT2P34897 504 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 HSD17B2P37059 387 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 NAMPTP43490 491 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 OR1G1P47890 313 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 CLDN8P56748 225 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 TLE4Q04727 773 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 MRGPRG-AS1Q2M3A8 158 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 GFI1BQ5VTD9 330 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 C11orf71Q6IPW1 123 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 TMEM53Q6P2H8 277 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 Q6ZSR3 168 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 FRA10AC1Q70Z53 315 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 ARCQ7LC44 396 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 NIPA1Q7RTP0 329 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 KRTAP7-1Q8IUC3 87 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 FTMTQ8N4E7 242 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 OR13F1Q8NGS4 319 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 ISG20Q96AZ6 181 aaKnown RBP3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 FGGYQ96C11 551 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 P2RY13Q9BPV8 354 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 C20orf96Q9NUD7 363 aaPredicted RBP3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 RSPH14Q9UHP6 348 aa3.16□□□□□ -1.9
AC004542.1-201ENST00000602955 IGLV8-61A0A075B6I0 122 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 A0A087WWV3 80 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 ARPC4-TTLL3A0A0A6YYG9 625 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 A0A0G2JRQ6 117 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 SUPT3HB4E1H0 165 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 WWP2O00308 870 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 MBTPS2O43462 519 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 LYPLA1O75608 230 aaPredicted RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 SEMG1P04279 462 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 ERCC1P07992 297 aaPredicted RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 CCNB1P14635 433 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 ABOP16442 354 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 MT3P25713 68 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 RRM2P31350 389 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 UGT1A3P35503 534 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 CDKN1BP46527 198 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 CSNK1EP49674 416 aaKnown RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 GPM6AP51674 278 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 FBXW4P57775 412 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 RAB10P61026 200 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 MRPS22P82650 360 aaKnown RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 Q1RN00 199 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 KLHL40Q2TBA0 621 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 PIP5KL1Q5T9C9 394 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 RNLSQ5VYX0 342 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 CGB2Q6NT52 195 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 Q6ZTC4 211 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 SSX9Q7RTT3 188 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 PIANPQ8IYJ0 282 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 GABRG1Q8N1C3 465 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 PQLC3Q8N755 202 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 OR52I1Q8NGK6 324 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 CHCHD10Q8WYQ3 142 aaPredicted RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 NR4A3Q92570 626 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 KIFAP3Q92845 792 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 FGF11Q92914 225 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 STMN2Q93045 179 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 MS4A4EQ96PG1 132 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 SIGLEC12Q96PQ1 595 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 SELENOIQ9C0D9 397 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 GIN1Q9NXP7 522 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 PDP1Q9P0J1 537 aaPredicted RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 APOBEC3BQ9UH17 382 aaKnown RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 TBC1D24Q9ULP9 559 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 UBQLN1Q9UMX0 589 aaKnown RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 PACSIN2Q9UNF0 486 aaPredicted RBP3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 SNED1Q8TER0 1413 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 MROH2BQ7Z745 1585 aa3.15□□□□□ -1.91
AC004542.1-201ENST00000602955 USP47Q96K76 1375 aa3.14□□□□□ -1.91
AC004542.1-201ENST00000602955 EIF4G1Q04637 1599 aaKnown RBP3.14□□□□□ -1.91
AC004542.1-201ENST00000602955 NSG1A0A0A6YYJ2 146 aa3.14□□□□□ -1.91
AC004542.1-201ENST00000602955 TRAV25A0A0B4J276 109 aa3.14□□□□□ -1.91
AC004542.1-201ENST00000602955 FAM25EA8MYX2 175 aa3.14□□□□□ -1.91
AC004542.1-201ENST00000602955 GOLGA8TH3BQL2 631 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms