RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 KLHL21Q9UJP4 597 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 EXOSC1Q9Y3B2 195 aaKnown RBP13.73□□□□□ -0.21
HIF3A-218ENST00000600383 CNTRLQ7Z7A1 2325 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 C12orf71A8MTZ7 269 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 H3BML4 177 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 LRP3O75074 770 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 OPN1LWP04000 364 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 SCG5P05408 212 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 CD14P08571 375 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 MSX1P28360 303 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 SUMO3P55854 103 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-218ENST00000600383 WNT4P56705 351 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 MLF1P58340 268 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 FOXF1Q12946 379 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 IL10RAQ13651 578 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 SSX1Q16384 188 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 SLC6A19Q695T7 634 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 MAMDC2Q7Z304 686 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-218ENST00000600383 PSD4Q8NDX1 1056 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 OR10H4Q8NGA5 316 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 ZPLD1Q8TCW7 415 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 RNF138Q8WVD3 245 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 ARL5BQ96KC2 179 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 JSRP1Q96MG2 331 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-218ENST00000600383 PTDSS2Q9BVG9 487 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 RERGLQ9H628 205 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 HPF1Q9NWY4 346 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 CNOT1A5YKK6 2376 aaKnown RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 LOC101059948A0A1B0GTJ6 334 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 OR6C68A6NDL8 312 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 ARPC3O15145 178 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 AHSA1O95433 338 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 PLGP00747 810 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 CCL3P10147 92 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 TFPIP10646 304 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 UQCRC1P31930 480 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 APOBEC1P41238 236 aaKnown RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 ZNF468Q5VIY5 522 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 LEG1Q6P5S2 330 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 GLRX5Q86SX6 157 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 WDSUB1Q8N9V3 476 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 NPEPL1Q8NDH3 523 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 OR4K17Q8NGC6 315 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 KISS1RQ969F8 398 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 ZMYND19Q96E35 227 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 ZHX1-C8orf76Q96EF9 292 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 SH3GL3Q99963 347 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 ASB6Q9NWX5 421 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 ERVK13-1Q9NX77 482 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 TAS2R5Q9NYW4 299 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 SPIN1Q9Y657 262 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 CCDC182A6NF36 153 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 RNF13O43567 381 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 RAD1O60671 282 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 NPIPB7O75200 414 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 OR6A2O95222 327 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 HPP00738 406 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 IL11P20809 199 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 GRPRP30550 384 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 CDKN2AP42771 156 aaKnown RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 FOXK1P85037 733 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 SLC22A10Q63ZE4 541 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 JAZF1Q86VZ6 243 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 ACBD7Q8N6N7 88 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 IL22RA1Q8N6P7 574 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 TMEM99Q8N816 258 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 LRRC75AQ8NAA5 344 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 LSM14AQ8ND56 463 aaKnown RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 CENPOQ9BU64 300 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 GPR87Q9BY21 358 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 TMEM185BQ9H7F4 350 aa13.72□□□□□ -0.21
HIF3A-218ENST00000600383 EXOSC4Q9NPD3 245 aaKnown RBP13.72□□□□□ -0.21
HIF3A-218ENST00000600383 A0A1W2PQ72 361 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 TMEM129A0AVI4 362 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 DAPL1A0PJW8 107 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 FAM171A2A8MVW0 826 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 STMND1H3BQB6 276 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 IDH3BO43837 385 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 MT-ATP6P00846 226 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 TSPAN19P0C672 248 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 SLC2A5P22732 501 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 MDGA2Q7Z553 956 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 ATCAYQ86WG3 371 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 KDM8Q8N371 416 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 ZFP41Q8N8Y5 198 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 OR2M3Q8NG83 312 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 OR5J2Q8NH18 312 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 STK35Q8TDR2 534 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 TMEM203Q969S6 136 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 TSSK2Q96PF2 358 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 GPX7Q96SL4 187 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-218ENST00000600383 BCL7BQ9BQE9 202 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 ASPNQ9BXN1 380 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 PTGES2Q9H7Z7 377 aa13.71□□□□□ -0.21
HIF3A-218ENST00000600383 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.21
HIF3A-218ENST00000600383 C21orf140B9A014 251 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 H7C1C5 153 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 OR2T1O43869 369 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms