RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 NOSIPQ9Y314 301 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-214ENST00000597396 ITPR2Q14571 2701 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 J3KTA2 159 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 M0R082 166 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 BGLAPP02818 100 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 BNIP1Q12981 228 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 EXOC3L2Q2M3D2 409 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF474Q6S9Z5 364 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 CYP2R1Q6VVX0 501 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 NKAIN4Q8IVV8 208 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 OFCC1Q8IZS5 231 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 FAM86B1Q8N7N1 296 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF417Q8TAU3 575 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 CCDC124Q96CT7 223 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 CLPTM1LQ96KA5 538 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF587Q96SQ5 575 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 BTBD10Q9BSF8 475 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 SF3B5Q9BWJ5 86 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 ASPNQ9BXN1 380 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 SLC19A3Q9BZV2 496 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 FANCFQ9NPI8 374 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 RASD1Q9Y272 281 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 FAM32AQ9Y421 112 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 ENPP4Q9Y6X5 453 aa17.47■□□□□ 0.39
SHKBP1-214ENST00000597396 VAMP5O95183 116 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 POU2F1P14859 743 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 ATP6V1B2P21281 511 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 PEX19P40855 299 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 RBM34P42696 430 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 RASSF2P50749 326 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 IL1RL1Q01638 556 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 TRIM25Q14258 630 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 SLC17A1Q14916 467 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 MTX3Q5HYI7 312 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 BEND4Q6ZU67 534 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 DHFR2Q86XF0 187 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 DMRTC2Q8IXT2 367 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF100Q8IYN0 542 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 OR9K2Q8NGE7 335 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 TMEM255BQ8WV15 326 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 TMEM239Q8WW34 195 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 MCUR1Q96AQ8 359 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 SLC7A6OSQ96CW6 309 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 HS6ST2Q96MM7 605 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 SPOCK3Q9BQ16 436 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 ZNF426Q9BUY5 554 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 KLHL4Q9C0H6 718 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 ELOVL5Q9NYP7 299 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 RHCGQ9UBD6 479 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 CORINQ9Y5Q5 1042 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 FLVCR1Q9Y5Y0 555 aa17.46■□□□□ 0.39
SHKBP1-214ENST00000597396 hCG_2039718K7EN88 272 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 HNRNPRO43390 633 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 FZD7O75084 574 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 ATP5HO75947 161 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 MT-ATP6P00846 226 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 NQO1P15559 274 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 IGFBP2P18065 325 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 CD79BP40259 229 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 OR3A2P47893 321 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 P2RY4P51582 365 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 UGT2B15P54855 530 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 LTBQ06643 244 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 SNTB1Q13884 538 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 TRAM2Q15035 370 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 TFAP2EQ6VUC0 442 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 H1FNTQ75WM6 255 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 MOGAT1Q96PD6 335 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 SEC14L4Q9UDX3 406 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 B3GALT5Q9Y2C3 310 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 MED31Q9Y3C7 131 aa17.45■□□□□ 0.38
SHKBP1-214ENST00000597396 LRRN3E7EW58 273 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 MRPL33O75394 65 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 DNAJC8O75937 253 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 CH25HO95992 272 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 UMPSP11172 480 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 ITGA2P17301 1181 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 CBX1P83916 185 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 SORDQ00796 357 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 FAM27E3Q08E93 113 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 PMS2P3Q13401 168 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 LCN8Q6JVE9 175 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 CASP12Q6UXS9 341 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 KDM8Q8N371 416 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 SCAIQ8N9R8 606 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 ACBD4Q8NC06 268 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 ADPRHL1Q8NDY3 354 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 APH1AQ96BI3 265 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 ASB9Q96DX5 294 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 LRGUKQ96M69 825 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 SLC24A3Q9HC58 644 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 NANSQ9NR45 359 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 PARPBPQ9NWS1 579 aa17.44■□□□□ 0.38
SHKBP1-214ENST00000597396 ENO4A6NNW6 628 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 FFAR1O14842 300 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 MT-ND1P03886 318 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 ZNF43P17038 809 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 RHCEP18577 417 aa17.43■□□□□ 0.38
SHKBP1-214ENST00000597396 KIR2DL3P43628 341 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms