RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PRKCDQ05655 676 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 DAG1Q14118 895 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 TAF11Q15544 211 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 TMEM44Q2T9K0 475 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 SYT14P1Q58G82 188 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 C1orf140Q5VVS0 124 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 PGBD2Q6P3X8 592 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 LINC00114Q6XXX2 140 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 P3H2Q8IVL5 708 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 PACRGLQ8N7B6 248 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 GNPDA2Q8TDQ7 276 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 STK35Q8TDR2 534 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 BPIFA2Q96DR5 249 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 SGTBQ96EQ0 304 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 FAM46AQ96IP4 442 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 FEVQ99581 238 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 NPAS1Q99742 590 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 SLC6A15Q9H2J7 730 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 ZDHHC11Q9H8X9 412 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 ACKR4Q9NPB9 350 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 KRT84Q9NSB2 600 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 ENOPH1Q9UHY7 261 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 MAGED1Q9Y5V3 778 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 AP4B1Q9Y6B7 739 aa10.83□□□□□ -0.68
SHKBP1-213ENST00000597325 HEATR5AQ86XA9 2040 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 NINQ8N4C6 2090 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 TRGV5A0A0B4J1U4 118 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 EFCAB9A8MZ26 197 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 SOCS2O14508 198 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 IGF2P01344 180 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 IGFBP2P18065 325 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 IL11P20809 199 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 GSTM3P21266 225 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 PRKACGP22612 351 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 CBLP22681 906 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 FPR3P25089 353 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 IDUAP35475 653 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 VHLP40337 213 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 RPS5P46782 204 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 OMPP47874 163 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 CLK1P49759 484 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 CTBP2P56545 445 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 NUP107P57740 925 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 B3GALT5-AS1P59052 145 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 RAC1P63000 192 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 ADAM8P78325 824 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 RNFT1Q5M7Z0 435 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 FAHD1Q6P587 224 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 MEX3BQ6ZN04 569 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 GALNT4Q8N4A0 578 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 NEIL3Q8TAT5 605 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 MAGEE2Q8TD90 523 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 NINJ1Q92982 152 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 GTPBP3Q969Y2 492 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 OR5B2Q96R09 309 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 TAPBPLQ9BX59 468 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 DGCR6LQ9BY27 220 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 OR11A1Q9GZK7 315 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 NDEL1Q9GZM8 345 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 DEFB127Q9H1M4 99 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 TSPAN10Q9H1Z9 355 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 COQ10BQ9H8M1 238 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 SMURF2Q9HAU4 748 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 PAPOLBQ9NRJ5 636 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 USE1Q9NZ43 259 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 POFUT2Q9Y2G5 429 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 SLC6A5Q9Y345 797 aa10.82□□□□□ -0.68
SHKBP1-213ENST00000597325 ZC3H12DA2A288 527 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 NPIPA5E9PKD4 350 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 SEC14L5O43304 696 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 OR2T1O43869 369 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 HCN1O60741 890 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 OR7A10O76100 309 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 CH25HO95992 272 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 ACTL6AO96019 429 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 MT-ATP6P00846 226 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 GASTP01350 101 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 HIST1H2ABP04908 130 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 POU2F1P14859 743 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 RAD23AP54725 363 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 GFRA1P56159 465 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 PPP2R2BQ00005 443 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 TSPAN31Q12999 210 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 MFSD13AQ14CX5 517 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 RFX4Q33E94 735 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 TMEM176BQ3YBM2 270 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 PDSS1Q5T2R2 415 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 FAM69AQ5T7M9 428 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 ZNF770Q6IQ21 691 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 C1orf94Q6P1W5 598 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 GFRALQ6UXV0 394 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 HIST3H2AQ7L7L0 130 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 MEX3DQ86XN8 651 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 OR6S1Q8NH40 331 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 NRG4Q8WWG1 115 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 HIST1H2ACQ93077 130 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 KTI12Q96EK9 354 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 KLHL15Q96M94 604 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 TAAR6Q96RI8 345 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 NIPSNAP1Q9BPW8 284 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms