RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SLC6A6P31641 620 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 UQCRC1P31930 480 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 DIO1P49895 249 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 OR2B6P58173 313 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 CDK5Q00535 292 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 GINS1Q14691 196 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 PGGHGQ32M88 737 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 CMPK2Q5EBM0 449 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 RPUSD3Q6P087 351 aaKnown RBP13.17□□□□□ -0.3
VRK3-212ENST00000596814 TMPPEQ6ZT21 453 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 TRILQ7L0X0 811 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 GGNQ86UU5 652 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 C8orf59Q8N0T1 100 aaPredicted RBP13.17□□□□□ -0.3
VRK3-212ENST00000596814 MARVELD2Q8N4S9 558 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 SCAIQ8N9R8 606 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 OR2T33Q8NG76 320 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 OR4Q3Q8NH05 313 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 PRORYQ9H606 182 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 EXO5Q9H790 373 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 SEC14L4Q9UDX3 406 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 TRAPPC4Q9Y296 219 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 KIAA1549Q9HCM3 1950 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
VRK3-212ENST00000596814 TRGV5A0A0B4J1U4 118 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 SULT2B1O00204 365 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 TNFSF11O14788 317 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 TSPAN19P0C672 248 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 AQP2P41181 271 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 GIPRP48546 466 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 STARP49675 285 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 CLDN20P56880 219 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 CDC42P60953 191 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 RPL18Q07020 188 aaKnown RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 PMS2P3Q13401 168 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 ALG10Q5BKT4 473 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 C12orf73Q69YU5 71 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 KRT80Q6KB66 452 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 ESPNLQ6ZVH7 1005 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 CCDC71Q8IV32 467 aaPredicted RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 DEPDC4Q8N2C3 294 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 MOSPD2Q8NHP6 518 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 NEIL3Q8TAT5 605 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 TAAR6Q96RI8 345 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 IFT27Q9BW83 186 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 TEX12Q9BXU0 123 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 PRRG3Q9BZD7 231 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 CHST11Q9NPF2 352 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 IMPAD1Q9NX62 359 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 ZMIZ1Q9ULJ6 1067 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 A0A0J9YW62 118 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 MCIDASD6RGH6 385 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 BHLHE40O14503 412 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 EIF1AYO14602 144 aaKnown RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 OR6A2O95222 327 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 ACTL6AO96019 429 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 ADORA3P0DMS8 318 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 RPL4P36578 427 aaKnown RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 LHX2P50458 406 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 SLC35A1P78382 337 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 IL5RAQ01344 420 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 CTU2Q2VPK5 515 aaKnown RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 PLEKHN1Q494U1 663 aaPredicted RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 NADK2Q4G0N4 442 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 ACSM5Q6NUN0 579 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 CASP12Q6UXS9 341 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 IGFN1Q86VF2 1251 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 UBQLNLQ8IYU4 475 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 ABTB1Q969K4 478 aaPredicted RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 PNPLA2Q96AD5 504 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 TSPAN10Q9H1Z9 355 aaPredicted RBP13.16□□□□□ -0.3
VRK3-212ENST00000596814 LUZP4Q9P127 313 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 DNAJC13O75165 2243 aa13.16□□□□□ -0.3
VRK3-212ENST00000596814 H0YC42 278 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 PLPP3O14495 311 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 AKR7A3O95154 331 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 PPP1R3DO95685 299 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 IGHG3P01860 377 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 PDK3Q15120 406 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 HBMQ6B0K9 141 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 DPY19L2P2Q6ZN68 376 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 H1FNTQ75WM6 255 aaPredicted RBP13.15□□□□□ -0.3
VRK3-212ENST00000596814 THAP5Q7Z6K1 395 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 LRRC75AQ8NAA5 344 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 ADPRHL1Q8NDY3 354 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 OR2V1Q8NHB1 315 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 ADGRG7Q96K78 797 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 SLC38A2Q96QD8 506 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 TVP23BQ9NYZ1 205 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 BAIAP2Q9UQB8 552 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 B3GALT5Q9Y2C3 310 aa13.15□□□□□ -0.3
VRK3-212ENST00000596814 C11orf98E9PRG8 122 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 M0R129 80 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 RNF13O43567 381 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 DNPH1O43598 174 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 ZNF708P17019 499 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms