RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 MRASO14807 208 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 TMCC2O75069 709 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 IGHV3-9P01782 118 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 ITGA5P08648 1049 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 CD247P20963 164 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 CRYBA2P53672 197 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 FOXG1P55316 489 aaPredicted RBP11.49□□□□□ -0.57
USE1-207ENST00000596136 ADAM8P78325 824 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 FAPQ12884 760 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 VEZF1Q14119 521 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 PPA1Q15181 289 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 GABRA6Q16445 453 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 RABL3Q5HYI8 236 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 FAM69AQ5T7M9 428 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 INTS11Q5TA45 600 aaKnown RBP11.49□□□□□ -0.57
USE1-207ENST00000596136 TSPO2Q5TGU0 170 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 REP15Q6BDI9 236 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 TMEM225Q6GV28 225 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 OR7E24Q6IFN5 339 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 CASP12Q6UXS9 341 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 RANBP3LQ86VV4 465 aaPredicted RBP11.49□□□□□ -0.57
USE1-207ENST00000596136 KRTAP1-3Q8IUG1 177 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 EPHX4Q8IUS5 362 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 UBE2J2Q8N2K1 259 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 ZNF611Q8N823 705 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 POMGNT2Q8NAT1 580 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 SMYD1Q8NB12 490 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 LILRB1Q8NHL6 650 aaPredicted RBP11.49□□□□□ -0.57
USE1-207ENST00000596136 TAAR8Q969N4 342 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 TAMM41Q96BW9 452 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 ZNF583Q96ND8 569 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 PCDHAC1Q9H158 963 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 ESRP2Q9H6T0 727 aaKnown RBP11.49□□□□□ -0.57
USE1-207ENST00000596136 UBTD1Q9HAC8 227 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 TMEM27Q9HBJ8 222 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
USE1-207ENST00000596136 USF3Q68DE3 2245 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 TRAV36DV7A0A075B6V5 113 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 LOC100653049A0A140TA62 436 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 HS3ST1O14792 307 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 KRT34O76011 436 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 PAX1P15863 534 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 RPS5P46782 204 aaKnown RBP11.48□□□□□ -0.57
USE1-207ENST00000596136 CDH12P55289 794 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 NCALDP61601 193 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 MFSD13AQ14CX5 517 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 NPTX1Q15818 432 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 MMEL1Q495T6 779 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 ZNF613Q6PF04 617 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 AAED1Q7RTV5 226 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 GPAT4Q86UL3 456 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 SNX32Q86XE0 403 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 PCYOX1LQ8NBM8 494 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 ADPRHL1Q8NDY3 354 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 C1orf162Q8NEQ5 155 aaPredicted RBP11.48□□□□□ -0.57
USE1-207ENST00000596136 OR6T1Q8NGN1 323 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 RASSF5Q8WWW0 418 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 MUCL1Q96DR8 90 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 SLC41A3Q96GZ6 507 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 MCHR1Q99705 422 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 TMEM43Q9BTV4 400 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 SLCO5A1Q9H2Y9 848 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 GID8Q9NWU2 228 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 B3GAT1Q9P2W7 334 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 B3GALT5Q9Y2C3 310 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 RNF115Q9Y4L5 304 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 SLC25A15Q9Y619 301 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 CAPN7Q9Y6W3 813 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 ZFHX3Q15911 3703 aa11.48□□□□□ -0.57
USE1-207ENST00000596136 SETD2Q9BYW2 2564 aaPredicted RBP11.47□□□□□ -0.57
USE1-207ENST00000596136 HEATR1Q9H583 2144 aaKnown RBP11.47□□□□□ -0.57
USE1-207ENST00000596136 CIB4A0PJX0 185 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 OR6C65A6NJZ3 312 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 RAD51DO75771 328 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 ZNF432O94892 652 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 LYPD3O95274 346 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 BGLAPP02818 100 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 OPN1SWP03999 348 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 CD3EP07766 207 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 MPGP29372 298 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 TGFBR3Q03167 851 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 BSPH1Q075Z2 132 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 SF3A3Q12874 501 aaKnown RBP eCLIP11.47□□□□□ -0.57
USE1-207ENST00000596136 STK11Q15831 433 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 SHEQ5VZ18 495 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 ERICH5Q6P6B1 374 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 NHLRC1Q6VVB1 395 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 H1FNTQ75WM6 255 aaPredicted RBP11.47□□□□□ -0.57
USE1-207ENST00000596136 C17orf78Q8N4C9 275 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 OR4D11Q8NGI4 311 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 RP9Q8TA86 221 aaKnown RBP11.47□□□□□ -0.57
USE1-207ENST00000596136 SLC25A36Q96CQ1 311 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 OXGR1Q96P68 337 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 EPYCQ99645 322 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 CCL19Q99731 98 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 ECSITQ9BQ95 431 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 DLL4Q9NR61 685 aa11.47□□□□□ -0.57
USE1-207ENST00000596136 NPAP1Q9NZP6 1156 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms