RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FABP5Q01469 135 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 TCTE1Q5JU00 501 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 PRAMEF17Q5VTA0 474 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 ADAMTS14Q8WXS8 1223 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 CNOT9Q92600 299 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 VSTM2LQ96N03 204 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 DPH1Q9BZG8 443 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 NLGN3Q9NZ94 848 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 PFDN2Q9UHV9 154 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 AHCYP23526 432 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 LCN1P31025 176 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 STAT5AP42229 794 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 OR1D4P47884 311 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 ARL4DP49703 201 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 EFNB1P98172 346 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 OPCMLQ14982 345 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 TSSK4Q6SA08 328 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 SLC36A4Q6YBV0 504 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 C3P1Q6ZMU1 363 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 SLC25A45Q8N413 288 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 OR4Q3Q8NH05 313 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 FANK1Q8TC84 345 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 LMF2Q9BU23 707 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 RERGLQ9H628 205 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 C20orf141Q9NUB4 165 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 EMC3Q9P0I2 261 aa15.66■□□□□ 0.1
SHKBP1-205ENST00000594973 TRAV6A0A075B6T7 132 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 TMEM150CB9EJG8 249 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 PRSS44E7EML9 344 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 K7ESF4 209 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 TCRBP04435 133 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 FGF2P09038 288 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 NPSR1Q6W5P4 371 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 POGLUT1Q8NBL1 392 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 RCBTB1Q8NDN9 531 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 OSTF1Q92882 214 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 PTCHD1Q96NR3 888 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 MRPS18AQ9NVS2 196 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 EXTL2Q9UBQ6 330 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 SIT1Q9Y3P8 196 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 A0A0C4DFX4 3053 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 H0YC42 278 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 KLF4O43474 513 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 CSTF1Q05048 431 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 CRYZQ08257 329 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 GRM7Q14831 915 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 ZNF620Q6ZNG0 422 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 HSD17B13Q7Z5P4 300 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 SLC35F3Q8IY50 421 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 EIF4E3Q8N5X7 224 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 C16orf52Q8NHV5 167 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 TMEM239Q8WW34 195 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 FGF11Q92914 225 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 CLDN23Q96B33 292 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 SAMD8Q96LT4 415 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 MS4A7Q9GZW8 240 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 SAV1Q9H4B6 383 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 BRD7Q9NPI1 651 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 FANCFQ9NPI8 374 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 CYSLTR2Q9NS75 346 aa15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 DHCR7Q9UBM7 475 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-205ENST00000594973 SEC16AO15027 2179 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 IGHV1OR21-1A0A087WYE8 117 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 PRAMEF2O60811 474 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 IFI6P09912 130 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 GPR3P46089 330 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 IGLV3-21P80748 117 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 DHODHQ02127 395 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 CFHR1Q03591 330 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 ETFDHQ16134 617 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 TMEM91Q6ZNR0 172 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 ASB18Q6ZVZ8 466 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 SHFQ7M4L6 423 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 LRRC28Q86X40 367 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 FTMTQ8N4E7 242 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 DNASE2BQ8WZ79 361 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 HOXB13Q92826 284 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 OR10A5Q9H207 317 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 FGF20Q9NP95 211 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 KRCC1Q9NPI7 259 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 ZNF275Q9NSD4 429 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 CUTCQ9NTM9 273 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 OR10H1Q9Y4A9 318 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 UNC13CQ8NB66 2214 aa15.64■□□□□ 0.09
SHKBP1-205ENST00000594973 HYAL3O43820 417 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 ZNF254O75437 659 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 B3GALNT1O75752 331 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 SLC2A10O95528 541 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 FOSL1P15407 271 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 ELK1P19419 428 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 MAKP20794 623 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 HSD17B7P56937 341 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 ZP2Q05996 745 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 ADAMTS18Q8TE60 1221 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 ST8SIA2Q92186 375 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 RNFT2Q96EX2 444 aa15.63■□□□□ 0.09
SHKBP1-205ENST00000594973 C1QTNF6Q9BXI9 259 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms