RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 EDNRAP25101 427 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 HTR2AP28223 471 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 MDH1P40925 334 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 ALKBH2Q6NS38 261 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 NANOGP8Q6NSW7 305 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 ZNF613Q6PF04 617 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 KLHL17Q6TDP4 642 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 TMEM171Q8WVE6 324 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 LRRC58Q96CX6 371 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 RADILQ96JH8 1075 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 AMBRA1Q9C0C7 1298 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 CXorf56Q9H5V9 222 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 NANOGQ9H9S0 305 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 RCE1Q9Y256 329 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 B3GALT5Q9Y2C3 310 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 AP3M1Q9Y2T2 418 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 AMDHD2Q9Y303 409 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 CORINQ9Y5Q5 1042 aa15.64■□□□□ 0.09
SHKBP1-204ENST00000594862 A0A087WUJ7 227 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 PDLIM1O00151 329 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 FBP2O00757 339 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 KRT33AO76009 404 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 LGI1O95970 557 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 FOSL1P15407 271 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 MPGP29372 298 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 RPS5P46782 204 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 NKX6-1P78426 367 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 EGR4Q05215 589 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 DMTNQ08495 405 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 SELPLGQ14242 412 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 VMACQ2NL98 169 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 REP15Q6BDI9 236 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 CGB2Q6NT52 195 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 KLHL24Q6TFL4 600 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 TMEM108Q6UXF1 575 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 P3H2Q8IVL5 708 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 ADPRHL1Q8NDY3 354 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 OR10A6Q8NH74 314 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 FBXW5Q969U6 566 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 SLC25A36Q96CQ1 311 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 ARHGDIGQ99819 225 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 ECSITQ9BQ95 431 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 TMEM43Q9BTV4 400 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 PTDSS2Q9BVG9 487 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 TMUB1Q9BVT8 246 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 MGAT4BQ9UQ53 548 aa15.63■□□□□ 0.09
SHKBP1-204ENST00000594862 M0QX08 132 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 CLOCKO15516 846 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 CCDC22O60826 627 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 IFNA14P01570 189 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 ZNF43P17038 809 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 P2RY4P51582 365 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 ADAM8P78325 824 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 BSPH1Q075Z2 132 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 VEZF1Q14119 521 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 OR1Q1Q15612 314 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 GABRA6Q16445 453 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 GLIPR1L2Q4G1C9 344 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 TSPO2Q5TGU0 170 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 PRSS57Q6UWY2 283 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 SEZ6L2Q6UXD5 910 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 CREB3L2Q70SY1 520 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 CCDC80Q76M96 950 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 ARPINQ7Z6K5 226 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 COMTD1Q86VU5 262 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 SNX32Q86XE0 403 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 ZIC4Q8N9L1 334 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 SCAIQ8N9R8 606 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 SMYD1Q8NB12 490 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 RNF217Q8TC41 542 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 AKAP1Q92667 903 aaKnown RBP eCLIP15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 KTI12Q96EK9 354 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 MUS81Q96NY9 551 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 ZNF317Q96PQ6 595 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 MOV10Q9HCE1 1003 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 OBP2BQ9NPH6 170 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 SLC7A10Q9NS82 523 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 FAIMQ9NVQ4 179 aa15.62■□□□□ 0.09
SHKBP1-204ENST00000594862 LOC102725191A0A1B0GVB3 256 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 ZNF587BE7ETH6 402 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 FXYD1O00168 92 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 CHP2O43745 196 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 ITGA5P08648 1049 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 PAX1P15863 534 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 PTAFRP25105 342 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 NTF4P34130 210 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 SH3BGRP55822 239 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 NRF1Q16656 503 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 ANKK1Q8NFD2 765 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 BOD1Q96IK1 185 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 OXGR1Q96P68 337 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 ZNF385AQ96PM9 386 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 MCHR1Q99705 422 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 ASPNQ9BXN1 380 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 GSX2Q9BZM3 304 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 LINC00470Q9BZP3 86 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 BAG5Q9UL15 447 aa15.61■□□□□ 0.09
SHKBP1-204ENST00000594862 WNT11O96014 354 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 MT-ATP6P00846 226 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms