RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 RASD1Q9Y272 281 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 AMDHD2Q9Y303 409 aa20.6■□□□□ 0.89
LSM4-204ENST00000594828 NIPBLQ6KC79 2804 aaeCLIP20.6■□□□□ 0.89
LSM4-204ENST00000594828 KRT33AO76009 404 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 CDH2P19022 906 aaPredicted RBP20.59■□□□□ 0.89
LSM4-204ENST00000594828 SLC6A2P23975 617 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 RPS5P46782 204 aaKnown RBP20.59■□□□□ 0.89
LSM4-204ENST00000594828 TNK1Q13470 666 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 SCARB2Q14108 478 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 C1QTNF12Q5T7M4 302 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 AGAP6Q5VW22 663 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 DHRS4L2Q6PKH6 230 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 ABHD12BQ7Z5M8 362 aaPredicted RBP20.59■□□□□ 0.89
LSM4-204ENST00000594828 DTX2Q86UW9 622 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 LSMEM1Q8N8F7 131 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 STON2Q8WXE9 905 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 PTDSS2Q9BVG9 487 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 C12orf10Q9HB07 376 aa20.59■□□□□ 0.89
LSM4-204ENST00000594828 CADP27708 2225 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 FTCDNL1E5RQL4 147 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 E7EQL1 145 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 TPST1O60507 370 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 PTNP21246 168 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 GTF2E2P29084 291 aaKnown RBP20.58■□□□□ 0.89
LSM4-204ENST00000594828 PRPS1P60891 318 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 SPOCK1Q08629 439 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 VEZF1Q14119 521 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 C6orf89Q6UWU4 347 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 DLEU7Q6UYE1 221 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 EPHX4Q8IUS5 362 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 DNAJA4Q8WW22 397 aaPredicted RBP20.58■□□□□ 0.89
LSM4-204ENST00000594828 KTI12Q96EK9 354 aaPredicted RBP20.58■□□□□ 0.89
LSM4-204ENST00000594828 ZNF607Q96SK3 696 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 DHRS9Q9BPW9 319 aa20.58■□□□□ 0.89
LSM4-204ENST00000594828 LEF1Q9UJU2 399 aaPredicted RBP20.58■□□□□ 0.89
LSM4-204ENST00000594828 A0A1B0GWA3 101 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 PRORSD1PA6NEY8 169 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 OR2T1O43869 369 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 SERPINB7O75635 380 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 PNMTP11086 282 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 HTR2AP28223 471 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 TTKP33981 857 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 SELENOPP49908 381 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 ADRM1Q16186 407 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 GLIPR1L2Q4G1C9 344 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 RUNDC3AQ59EK9 446 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 NIPAL3Q6P499 406 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 KLHL24Q6TFL4 600 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 COMTD1Q86VU5 262 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 KDM8Q8N371 416 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 PRR14Q9BWN1 585 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 TRIM33Q9UPN9 1127 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 NDUFAF1Q9Y375 327 aa20.57■□□□□ 0.88
LSM4-204ENST00000594828 OR6C65A6NJZ3 312 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 WNT11O96014 354 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 IGHV4-39P01824 125 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 AQP1P29972 269 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 SLC25A3Q00325 362 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 ALG10BQ5I7T1 473 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 ULK3Q6PHR2 472 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 C5orf46Q6UWT4 87 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 HIPK4Q8NE63 616 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 BHLHE22Q8NFJ8 381 aaPredicted RBP20.56■□□□□ 0.88
LSM4-204ENST00000594828 BOD1Q96IK1 185 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 HS6ST2Q96MM7 605 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 CPPED1Q9BRF8 314 aaPredicted RBP20.56■□□□□ 0.88
LSM4-204ENST00000594828 GDF2Q9UK05 429 aaPredicted RBP20.56■□□□□ 0.88
LSM4-204ENST00000594828 SLC13A4Q9UKG4 626 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 B3GALT5Q9Y2C3 310 aa20.56■□□□□ 0.88
LSM4-204ENST00000594828 ZNF587BE7ETH6 402 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 NDUFS7O75251 213 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 H2AFXP16104 143 aaPredicted RBP20.55■□□□□ 0.88
LSM4-204ENST00000594828 ZNF43P17038 809 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 ACVR1BP36896 505 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 NCALDP61601 193 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 LGALS3BPQ08380 585 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 HIKESHIQ53FT3 197 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 FAM69AQ5T7M9 428 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 NET1Q7Z628 596 aaPredicted RBP20.55■□□□□ 0.88
LSM4-204ENST00000594828 DHDDSQ86SQ9 333 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 ARMC8Q8IUR7 673 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 FBXL14Q8N1E6 418 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 SLC38A4Q969I6 547 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 TAAR8Q969N4 342 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 FKRPQ9H9S5 495 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 TMEM27Q9HBJ8 222 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 BARX1Q9HBU1 254 aaPredicted RBP20.55■□□□□ 0.88
LSM4-204ENST00000594828 NPHS2Q9NP85 383 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 CBLN4Q9NTU7 201 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 SELENONQ9NZV5 590 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 TESQ9UGI8 421 aaKnown RBP20.55■□□□□ 0.88
LSM4-204ENST00000594828 ANGPT4Q9Y264 503 aa20.55■□□□□ 0.88
LSM4-204ENST00000594828 RNF223E7ERA6 249 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 ANGPT2O15123 496 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 EDF1O60869 148 aaKnown RBP20.54■□□□□ 0.88
LSM4-204ENST00000594828 LGI1O95970 557 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 FABP6P51161 128 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 CLDN17P56750 224 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 RGS8P57771 180 aaPredicted RBP20.54■□□□□ 0.88
LSM4-204ENST00000594828 FAM91A1Q658Y4 838 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms