RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZFP64Q9NPA5 681 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 ACOT13Q9NPJ3 140 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 SERINC1Q9NRX5 453 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 RPH3AQ9Y2J0 694 aaPredicted RBP13.7□□□□□ -0.22
VRK3-207ENST00000594092 SPTBN4Q9H254 2564 aa13.7□□□□□ -0.22
VRK3-207ENST00000594092 MCIDASD6RGH6 385 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 FTCDNL1E5RQL4 147 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 BLOC1S5-TXNDC5H3BN57 136 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 OR2T1O43869 369 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 SEC14L2O76054 403 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 SLC2A10O95528 541 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 PPP1R3DO95685 299 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 TSPAN19P0C672 248 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 RFPL3SP0C7P2 107 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 DBTP11182 482 aaKnown RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 C21orf33P30042 268 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 UQCRC1P31930 480 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 AQP2P41181 271 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 PRPS1P60891 318 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 ZNF91Q05481 1191 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 TBCEQ15813 527 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 ANKDD1AQ495B1 522 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 C3orf33Q6P1S2 294 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 MAMDC2Q7Z304 686 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 IGFN1Q86VF2 1251 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 ANKK1Q8NFD2 765 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 OR2M7Q8NG81 312 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 OR6S1Q8NH40 331 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 HAS2Q92819 552 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 UBL7Q96S82 380 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 POTEKPQ9BYX7 375 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 KCNMB2Q9Y691 235 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 KDM4EB2RXH2 506 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 H3BML4 177 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 PRODHO43272 600 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 INMTO95050 263 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 HIST1H2ABP04908 130 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 TFPIP10646 304 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 PEPDP12955 493 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 GRPRP30550 384 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 SRD5A2P31213 254 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 FOXK2Q01167 660 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 SELENBP1Q13228 472 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.69□□□□□ -0.22
VRK3-207ENST00000594092 SLC35F1Q5T1Q4 408 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 SLC6A19Q695T7 634 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 DPY19L2P2Q6ZN68 376 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 HIST3H2AQ7L7L0 130 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 NANOGNBQ7Z5D8 188 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 SULF2Q8IWU5 870 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 C9orf43Q8TAL5 461 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 SLC39A7Q92504 469 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 HIST1H2ACQ93077 130 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 RFKQ969G6 155 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 GPX7Q96SL4 187 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 TMEM185BQ9H7F4 350 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 KLHL1Q9NR64 748 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 SEC14L4Q9UDX3 406 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.69□□□□□ -0.22
VRK3-207ENST00000594092 BOKQ9UMX3 212 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 SPIN1Q9Y657 262 aaPredicted RBP13.69□□□□□ -0.22
VRK3-207ENST00000594092 CEP295Q9C0D2 2601 aa13.69□□□□□ -0.22
VRK3-207ENST00000594092 IRGMA1A4Y4 181 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 NOL3O60936 208 aaKnown RBP13.68□□□□□ -0.22
VRK3-207ENST00000594092 SP1P08047 785 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 RPL4P36578 427 aaKnown RBP13.68□□□□□ -0.22
VRK3-207ENST00000594092 GP2P55259 537 aaKnown RBP13.68□□□□□ -0.22
VRK3-207ENST00000594092 RPL18Q07020 188 aaKnown RBP13.68□□□□□ -0.22
VRK3-207ENST00000594092 GLYR1Q49A26 553 aaPredicted RBP13.68□□□□□ -0.22
VRK3-207ENST00000594092 GPR107Q5VW38 600 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 RAET1LQ5VY80 246 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 SLC25A25Q6KCM7 469 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 LRRC75AQ8NAA5 344 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 OR5J2Q8NH18 312 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 ZNF420Q8TAQ5 688 aaPredicted RBP13.68□□□□□ -0.22
VRK3-207ENST00000594092 TMEM80Q96HE8 168 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 YIPF3Q9GZM5 350 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 FN3KQ9H479 309 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 CMC2Q9NRP2 79 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 SSUH2Q9Y2M2 353 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 APC2O95996 2303 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 CFAP47Q6ZTR5 3102 aa13.68□□□□□ -0.22
VRK3-207ENST00000594092 LOC400499M0QZD8 3231 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 OR2M5A3KFT3 312 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ZNF701M0R085 212 aaPredicted RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 NME2P1O60361 137 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 OPN1LWP04000 364 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 IMPDH2P12268 514 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ZNF17P17021 662 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 NME2P22392 152 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 DCKP27707 260 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 SHC1P29353 583 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 NOS3P29474 1203 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 CDH11P55287 796 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ARG2P78540 354 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 TOMM20Q15388 145 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 SGCBQ16585 318 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 KLHL22Q53GT1 634 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ALG10Q5BKT4 473 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms