RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 HES5Q5TA89 166 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 SYS1Q8N2H4 156 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 SLC25A18Q9H1K4 315 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 POLE3Q9NRF9 147 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 HRASLS2Q9NWW9 162 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 RPS6KB2Q9UBS0 482 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 DTX4Q9Y2E6 619 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 ENTPD2Q9Y5L3 495 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 BET1O15155 118 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 CTDSPLO15194 276 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 SERPINI2O75830 405 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 HOXC4P09017 264 aaPredicted RBP15.12■□□□□ 0.01
LIG1-206ENST00000594067 GRPRP30550 384 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 PON3Q15166 354 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 ALG11Q2TAA5 492 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 TMEM255AQ5JRV8 349 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 CMTM4Q8IZR5 234 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 OR9A4Q8NGU2 314 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 OR6K6Q8NGW6 343 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 PMM1Q92871 262 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 NOX4Q9NPH5 578 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 NRIP3Q9NQ35 241 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 RDH8Q9NYR8 311 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 NCDNQ9UBB6 729 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 SCML1Q9UN30 329 aa15.12■□□□□ 0.01
LIG1-206ENST00000594067 PCDHGA9Q9Y5G4 932 aaKnown RBP15.12■□□□□ 0.01
LIG1-206ENST00000594067 A0A0C4DFX4 3053 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 KHNYNO15037 678 aaKnown RBP15.11■□□□□ 0.01
LIG1-206ENST00000594067 HOXD4P09016 255 aaPredicted RBP15.11■□□□□ 0.01
LIG1-206ENST00000594067 EPHA4P54764 986 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 RPL22L1Q6P5R6 122 aaKnown RBP15.11■□□□□ 0.01
LIG1-206ENST00000594067 LINGO2Q7L985 606 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 OVCH1Q7RTY7 1134 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 POMGNT2Q8NAT1 580 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 SGTBQ96EQ0 304 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 DDOQ99489 341 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 GABRG3Q99928 467 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 TWSG1Q9GZX9 223 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 EMC3Q9P0I2 261 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 ACOD1A6NK06 481 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 FAM171A2A8MVW0 826 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 C2orf74A8MZ97 194 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 APBB3O95704 486 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 SLC35E2P0CK97 266 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 NAGAP17050 411 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 GAS6Q14393 721 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 ULK3Q6PHR2 472 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 KCTD20Q7Z5Y7 419 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 IQCF2Q8IXL9 164 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 HSPA12BQ96MM6 686 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 CCDC3Q9BQI4 270 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 MKKSQ9NPJ1 570 aaPredicted RBP15.11■□□□□ 0.01
LIG1-206ENST00000594067 NPDC1Q9NQX5 325 aaPredicted RBP15.11■□□□□ 0.01
LIG1-206ENST00000594067 POT1Q9NUX5 634 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 POMT2Q9UKY4 750 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 DOCK8Q8NF50 2099 aa15.11■□□□□ 0.01
LIG1-206ENST00000594067 A0A1B0GVT2 93 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 PIN1P1O15428 100 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 GATBO75879 557 aaKnown RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 TGM6O95932 706 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 CTRB1P17538 263 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 S1PR1P21453 382 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 DIO1P49895 249 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 CCR9P51686 369 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 RAB38P57729 211 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 TSPAN5P62079 268 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 OPCMLQ14982 345 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 ZNHIT3Q15649 155 aaPredicted RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 NHLRC3Q5JS37 347 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 TCTE1Q5JU00 501 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 CTRB2Q6GPI1 263 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 LINC00114Q6XXX2 140 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 RNF44Q7L0R7 432 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 CHMP1BQ7LBR1 199 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 SLITRK4Q8IW52 837 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 SERPINA12Q8IW75 414 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 ZNF433Q8N7K0 673 aaPredicted RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 OR14A16Q8NHC5 309 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 LHFPL5Q8TAF8 219 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 RSC1A1Q92681 617 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 RASD2Q96D21 266 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 GFI1Q99684 422 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 GPR174Q9BXC1 333 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 C2orf42Q9NWW7 574 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 F5P12259 2224 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 RANBP2P49792 3224 aaKnown RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 OR6C68A6NDL8 312 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 CDC123O75794 336 aaPredicted RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 MAP2K6P52564 334 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 ERVK-25P63136 954 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 GGTLC2Q14390 218 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 UBE2NLQ5JXB2 153 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 KIAA1324Q6UXG2 1013 aaKnown RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 BAIAP2L2Q6UXY1 529 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 NPEPL1Q8NDH3 523 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 SPACA7Q96KW9 195 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 KLHL15Q96M94 604 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 C1QTNF6Q9BXI9 259 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 HRASLSQ9HDD0 168 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms