RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 TMEM99Q8N816 258 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 AQP11Q8NBQ7 271 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 MOSPD2Q8NHP6 518 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 ZNF417Q8TAU3 575 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 FNDC9Q8TBE3 224 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 CA5BP1Q8WTZ4 195 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 NRG4Q8WWG1 115 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 RND1Q92730 232 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 POP5Q969H6 163 aaKnown RBP8.62□□□□□ -1.03
DDX39A-220ENST00000593008 GTPBP3Q969Y2 492 aaKnown RBP8.62□□□□□ -1.03
DDX39A-220ENST00000593008 ZNF587Q96SQ5 575 aaPredicted RBP8.62□□□□□ -1.03
DDX39A-220ENST00000593008 NIPSNAP1Q9BPW8 284 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 TTYH2Q9BSA4 534 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 TMEM43Q9BTV4 400 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 UCK2Q9BZX2 261 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 POLR2J2Q9GZM3 115 aaKnown RBP8.62□□□□□ -1.03
DDX39A-220ENST00000593008 PRDM14Q9GZV8 571 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 ENKD1Q9H0I2 346 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 POLR2J3Q9H1A7 115 aaKnown RBP8.62□□□□□ -1.03
DDX39A-220ENST00000593008 SMURF2Q9HAU4 748 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 C12orf10Q9HB07 376 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 COQ3Q9NZJ6 369 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 PDP1Q9P0J1 537 aaPredicted RBP8.62□□□□□ -1.03
DDX39A-220ENST00000593008 IL20RAQ9UHF4 553 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 RNF6Q9Y252 685 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 GTF3C1Q12789 2109 aa8.62□□□□□ -1.03
DDX39A-220ENST00000593008 NKX2-6A6NCS4 301 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 SOCS2O14508 198 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ADAMDEC1O15204 470 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ZNF208O43345 1280 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 HNRNPRO43390 633 aaKnown RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 DEAF1O75398 565 aaPredicted RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 SERPINI2O75830 405 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 OR7A10O76100 309 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 CCNB2O95067 398 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 SOX14O95416 240 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 CLDN14O95500 239 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ATP6V1G2O95670 118 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ACTL6AO96019 429 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 PLGP00747 810 aaPredicted RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 GASTP01350 101 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 THRBP10828 461 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ZNF23P17027 643 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 AGAP20933 346 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 FPR1P21462 350 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 EDNRAP25101 427 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 FKBP2P26885 142 aaKnown RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 P2RY4P51582 365 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 FXYD6P3P58550 94 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 PRKCDQ05655 676 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ZNF239Q16600 458 aaKnown RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 LRRC36Q1X8D7 754 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ACSF3Q4G176 576 aaPredicted RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 OTUD3Q5T2D3 398 aaPredicted RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 C1orf185Q5T7R7 199 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ZFP1Q6P2D0 407 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 SHQ1Q6PI26 577 aaKnown RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 TMPPEQ6ZT21 453 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 C9orf106Q8NAJ2 232 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 PIGXQ8TBF5 258 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ABHD3Q8WU67 409 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 OSTF1Q92882 214 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 MARVELD3Q96A59 401 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ZNF775Q96BV0 537 aaPredicted RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 DDIT4LQ96D03 193 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 BPIFA2Q96DR5 249 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 SGTBQ96EQ0 304 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 MPP4Q96JB8 637 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 TRIB1Q96RU8 372 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 EPYCQ99645 322 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 SLC29A1Q99808 456 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 CIB1Q99828 191 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 PLA2G12AQ9BZM1 189 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 SERINC1Q9NRX5 453 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ING1Q9UK53 422 aaPredicted RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 MED31Q9Y3C7 131 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 KLF2Q9Y5W3 355 aaPredicted RBP8.61□□□□□ -1.03
DDX39A-220ENST00000593008 AP4B1Q9Y6B7 739 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 ADGRG4Q8IZF6 3080 aa8.61□□□□□ -1.03
DDX39A-220ENST00000593008 A0A0G2JNJ9 132 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 EFCAB9A8MZ26 197 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 SULT2B1O00204 365 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 EI24O14681 340 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 MGRN1O60291 552 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 WDR1O75083 606 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 TP53P04637 393 aaPredicted RBP8.6□□□□□ -1.03
DDX39A-220ENST00000593008 HOXD4P09016 255 aaPredicted RBP8.6□□□□□ -1.03
DDX39A-220ENST00000593008 HLA-DOBP13765 273 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 CPN1P15169 458 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 CHRNB4P30926 498 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 DNAJA1P31689 397 aaKnown RBP8.6□□□□□ -1.03
DDX39A-220ENST00000593008 AQP2P41181 271 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 RBM34P42696 430 aaKnown RBP8.6□□□□□ -1.03
DDX39A-220ENST00000593008 GSSP48637 474 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 DAPP51397 102 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 HMGA2P52926 109 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 CTBP2P56545 445 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 PON3Q15166 354 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 TRIP10Q15642 601 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 MICAQ29983 383 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms