RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	THBS2	P35442	1172 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	MVD	P53602	400 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	UBE2N	P61088	152 aa	Known RBP	13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	NAAA	Q02083	359 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	STX3	Q13277	289 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	MPP2	Q14168	576 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	WBP2NL	Q6ICG8	309 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	NIPAL3	Q6P499	406 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	EPHX4	Q8IUS5	362 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	CLIP4	Q8N3C7	705 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	BCL2L2	Q92843	193 aa	Predicted RBP	13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	ZBTB9	Q96C00	473 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	KCNS3	Q9BQ31	491 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	SOX7	Q9BT81	388 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	KATNB1	Q9BVA0	655 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	NELFA	Q9H3P2	528 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	GPR45	Q9Y5Y3	372 aa		13.41	□□□□□ -0.26
RFX2-223	ENST00000592883	DSPP	Q9NZW4	1301 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	LOC390937	A0A1W2PQ73	354 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883		B9A039	149 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	TM9SF1	O15321	606 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	RGS16	O15492	202 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	SNUPN	O95149	360 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	CRYAA	P02489	173 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	BCHE	P06276	602 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	OR4A8	P0C604	315 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	CECR9	P0C854	216 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	ETFA	P13804	333 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	CALCR	P30988	508 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	COPZ1	P61923	177 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	BST1	Q10588	318 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	ADIPOQ	Q15848	244 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	IQCC	Q4KMZ1	466 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	LIN52	Q52LA3	116 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	C1orf140	Q5VVS0	124 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	PRAMEF8	Q5VWM4	474 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	PRAMEF7	Q5VXH5	474 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	ANKRD16	Q6P6B7	361 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	KDM8	Q8N371	416 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	BPESC1	Q9GZL8	116 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	SSU72	Q9NP77	194 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	CRNN	Q9UBG3	495 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	P2RX2	Q9UBL9	471 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	CHST2	Q9Y4C5	530 aa		13.4	□□□□□ -0.26
RFX2-223	ENST00000592883	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	RFXANK	O14593	260 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	VAMP5	O95183	116 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	KRT75	O95678	551 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	TGFA	P01135	160 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	CELA3B	P08861	270 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	TFPT	P0C1Z6	253 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	NCF2	P19878	526 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	EPHA3	P29320	983 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	LRRC74A	Q0VAA2	488 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	SERPINA11	Q86U17	422 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	MYPOP	Q86VE0	399 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	KIRREL3	Q8IZU9	778 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	PLK3	Q9H4B4	646 aa		13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-223	ENST00000592883	LRP5L	A4QPB2	252 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	TMEM229A	B2RXF0	380 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	NPIPB7	O75200	414 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	PDE5A	O76074	875 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	IGLV1-44	P01699	117 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	ZNF23	P17027	643 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	CRAT	P43155	626 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	PPOX	P50336	477 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	CRISP3	P54108	245 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	CLDN17	P56750	224 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	DSTN	P60981	165 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	ROR2	Q01974	943 aa	Known RBP	13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	EFNB3	Q15768	340 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	GTDC1	Q4AE62	458 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	RNF220	Q5VTB9	566 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	ATG16L1	Q676U5	607 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	SLC38A5	Q8WUX1	472 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	SLC25A36	Q96CQ1	311 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	ZBTB18	Q99592	522 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	PAIP2	Q9BPZ3	127 aa	Known RBP	13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	LINC00470	Q9BZP3	86 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	KCNK9	Q9NPC2	374 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	CALML5	Q9NZT1	146 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	SEC14L4	Q9UDX3	406 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	RASD1	Q9Y272	281 aa		13.38	□□□□□ -0.27
RFX2-223	ENST00000592883	OR6C65	A6NJZ3	312 aa		13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	FTCDNL1	E5RQL4	147 aa		13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	AHSA1	O95433	338 aa		13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	STAMBP	O95630	424 aa		13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	IGKV3-15	P01624	115 aa		13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	PNMT	P11086	282 aa		13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	HNF1A	P20823	631 aa		13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	PAX7	P23759	505 aa		13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	RPS5	P46782	204 aa	Known RBP	13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	IDH3G	P51553	393 aa	Predicted RBP	13.37	□□□□□ -0.27
RFX2-223	ENST00000592883	ARF1	P84077	181 aa	Known RBP	13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms