RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SF3A3Q12874 501 aaKnown RBP eCLIP12.19□□□□□ -0.46
APOC1-208ENST00000592535 CYP51A1Q16850 503 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 ALG10BQ5I7T1 473 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 METTL21CQ5VZV1 264 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 OR7E24Q6IFN5 339 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 CREB3L2Q70SY1 520 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 ARMC8Q8IUR7 673 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
APOC1-208ENST00000592535 WDR31Q8NA23 367 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 C11orf65Q8NCR3 313 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 TSPEARQ8WU66 669 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 SMAP2Q8WU79 429 aaPredicted RBP12.19□□□□□ -0.46
APOC1-208ENST00000592535 PIF1Q9H611 641 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 MED4Q9NPJ6 270 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 TESQ9UGI8 421 aaKnown RBP12.19□□□□□ -0.46
APOC1-208ENST00000592535 RASD1Q9Y272 281 aa12.19□□□□□ -0.46
APOC1-208ENST00000592535 TRIM64A6NGJ6 449 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 TRIM64BA6NI03 449 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 FBP2O00757 339 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 TPST2O60704 377 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 OPN1SWP03999 348 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 GTF2E2P29084 291 aaKnown RBP12.18□□□□□ -0.46
APOC1-208ENST00000592535 MPGP29372 298 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 SELENOPP49908 381 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 CDH11P55287 796 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 ATP5J2P56134 94 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 PCBP3P57721 371 aaKnown RBP12.18□□□□□ -0.46
APOC1-208ENST00000592535 NCALDP61601 193 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 SLC25A3Q00325 362 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 LGALS3BPQ08380 585 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 SPOCK1Q08629 439 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 RBBP4Q09028 425 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 OR1Q1Q15612 314 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 PGGHGQ32M88 737 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 BIVMQ86UB2 503 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 EPHX4Q8IUS5 362 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 KDM8Q8N371 416 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 POMGNT2Q8NAT1 580 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 SMYD1Q8NB12 490 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 C1orf162Q8NEQ5 155 aaPredicted RBP12.18□□□□□ -0.46
APOC1-208ENST00000592535 BHLHE22Q8NFJ8 381 aaPredicted RBP12.18□□□□□ -0.46
APOC1-208ENST00000592535 DNAJA4Q8WW22 397 aaPredicted RBP12.18□□□□□ -0.46
APOC1-208ENST00000592535 SLC38A4Q969I6 547 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 TAAR8Q969N4 342 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 COX4I2Q96KJ9 171 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 C1QTNF6Q9BXI9 259 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 SLC17A5Q9NRA2 495 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 FGFR1OP2Q9NVK5 253 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 CISD1Q9NZ45 108 aaKnown RBP12.18□□□□□ -0.46
APOC1-208ENST00000592535 SLC13A4Q9UKG4 626 aa12.18□□□□□ -0.46
APOC1-208ENST00000592535 MAGED1Q9Y5V3 778 aaPredicted RBP12.18□□□□□ -0.46
APOC1-208ENST00000592535 SETD2Q9BYW2 2564 aaPredicted RBP12.18□□□□□ -0.46
APOC1-208ENST00000592535 A0A0B4J2E0 115 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 A0A1B0GX12 115 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 H7C1Q1 480 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 M0QX08 132 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 M0R1B8 84 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 M0R3H8 397 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 OVOL3O00110 214 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 FZD7O75084 574 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 CDH2P19022 906 aaPredicted RBP12.17□□□□□ -0.46
APOC1-208ENST00000592535 CBLP22681 906 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 CD40P25942 277 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 GRPRP30550 384 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 FAM69AQ5T7M9 428 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 FAM91A1Q658Y4 838 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 NIPAL3Q6P499 406 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 ULK3Q6PHR2 472 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 KLHL17Q6TDP4 642 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 C5orf46Q6UWT4 87 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 TMEM108Q6UXF1 575 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 Q71RC1 249 aaPredicted RBP12.17□□□□□ -0.46
APOC1-208ENST00000592535 NET1Q7Z628 596 aaPredicted RBP12.17□□□□□ -0.46
APOC1-208ENST00000592535 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
APOC1-208ENST00000592535 C17orf78Q8N4C9 275 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 GPR32P1Q8NGA4 272 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 OR10A6Q8NH74 314 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 RNF217Q8TC41 542 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 SLC47A1Q96FL8 570 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 ALKBH3Q96Q83 286 aaPredicted RBP12.17□□□□□ -0.46
APOC1-208ENST00000592535 KAT8Q9H7Z6 458 aaKnown RBP12.17□□□□□ -0.46
APOC1-208ENST00000592535 TMEM27Q9HBJ8 222 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 B3GAT1Q9P2W7 334 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 AMDHD2Q9Y303 409 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 PLCE1Q9P212 2302 aa12.17□□□□□ -0.46
APOC1-208ENST00000592535 TRAV36DV7A0A075B6V5 113 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 A0A087WUJ7 227 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 M0R082 166 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 SMAD7O15105 426 aaKnown RBP12.16□□□□□ -0.46
APOC1-208ENST00000592535 OR2T1O43869 369 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 UPK3AO75631 287 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 KRT33AO76009 404 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 TROVE2P10155 538 aaKnown RBP eCLIP12.16□□□□□ -0.46
APOC1-208ENST00000592535 PTNP21246 168 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 PTAFRP25105 342 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 PCGF2P35227 344 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 CDKN1AP38936 164 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 ARFIP2P53365 341 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms