RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 VAMP5O95183 116 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 LGI1O95970 557 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 ZCCHC18P0CG32 403 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 USF1P22415 310 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-215ENST00000590696 GTDC1Q4AE62 458 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 TMEM158Q8WZ71 300 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 TMEM19Q96HH6 336 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 SLC38A2Q96QD8 506 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 TMEM160Q9NX00 188 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 ZNF232Q9UNY5 417 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 CHST2Q9Y4C5 530 aa18.98■□□□□ 0.63
DDX39A-215ENST00000590696 A0A0G2JPF8 293 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 HNRNPCL2B2RXH8 293 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 HNRNPCL3B7ZW38 293 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 ZNF587BE7ETH6 402 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 SLCO1B7G3V0H7 640 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 HNRNPCL1O60812 293 aaKnown RBP18.97■□□□□ 0.63
DDX39A-215ENST00000590696 HNRNPCL4P0DMR1 293 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 IGHV4-31P0DP07 118 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 LSM11P83369 360 aaKnown RBP eCLIP18.97■□□□□ 0.63
DDX39A-215ENST00000590696 ZSWIM7Q19AV6 140 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 SLC9B1Q4ZJI4 515 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 PRAMEF8Q5VWM4 474 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 PRAMEF7Q5VXH5 474 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 NIPAL3Q6P499 406 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 CROCCP2Q86T23 111 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 SERPINA11Q86U17 422 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 EPHX4Q8IUS5 362 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 MGARPQ8TDB4 240 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 C3orf49Q96BT1 292 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 ITCHQ96J02 903 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 MAELQ96JY0 434 aaKnown RBP18.97■□□□□ 0.63
DDX39A-215ENST00000590696 ALKBH3Q96Q83 286 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-215ENST00000590696 KCNS3Q9BQ31 491 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 SPATA9Q9BWV2 254 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 BEX2Q9BXY8 128 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 RMND5AQ9H871 391 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 RASD1Q9Y272 281 aa18.97■□□□□ 0.63
DDX39A-215ENST00000590696 A0A096LPI6 279 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 TMEM120BA0PK00 339 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 TMEM247A6NEH6 219 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 TMEM229AB2RXF0 380 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 NPIPB7O75200 414 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 ZNF16P17020 682 aaPredicted RBP18.96■□□□□ 0.63
DDX39A-215ENST00000590696 UBE2NP61088 152 aaKnown RBP18.96■□□□□ 0.63
DDX39A-215ENST00000590696 ATG16L1Q676U5 607 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 LINGO2Q7L985 606 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 STK35Q8TDR2 534 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 BCL2L2Q92843 193 aaPredicted RBP18.96■□□□□ 0.63
DDX39A-215ENST00000590696 VPS33AQ96AX1 596 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 SLC25A36Q96CQ1 311 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 SORCS2Q96PQ0 1159 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 ARMC7Q9H6L4 198 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 CACYBPQ9HB71 228 aaKnown RBP18.96■□□□□ 0.63
DDX39A-215ENST00000590696 THUMPD1Q9NXG2 353 aaKnown RBP18.96■□□□□ 0.63
DDX39A-215ENST00000590696 ZIM2Q9NZV7 527 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 RAB21Q9UL25 225 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 IFT52Q9Y366 437 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 FKBP7Q9Y680 259 aa18.96■□□□□ 0.63
DDX39A-215ENST00000590696 OR6C65A6NJZ3 312 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 NR5A2O00482 541 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 PHF1O43189 567 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-215ENST00000590696 UPK3AO75631 287 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 AHSA1O95433 338 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 CRYAAP02489 173 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 SERPINF1P36955 418 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 PDLIM4P50479 330 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 SNRPD2P62316 118 aaKnown RBP18.95■□□□□ 0.62
DDX39A-215ENST00000590696 ZNF311Q5JNZ3 666 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 C6orf10Q5SRN2 563 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 MSANTD1Q6ZTZ1 278 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 KDM8Q8N371 416 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 MFSD8Q8NHS3 518 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 KATNB1Q9BVA0 655 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 SDR39U1Q9NRG7 319 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-215ENST00000590696 CA10Q9NS85 328 aa18.95■□□□□ 0.62
DDX39A-215ENST00000590696 A0A096LPE4 126 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 ARPC4-TTLL3A0A0A6YYG9 625 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 A0A1W2PPZ6 126 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 VWC2LB2RUY7 222 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 FTCDNL1E5RQL4 147 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 PAX7P23759 505 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 RPS5P46782 204 aaKnown RBP18.94■□□□□ 0.62
DDX39A-215ENST00000590696 POLR2JP52435 117 aaKnown RBP18.94■□□□□ 0.62
DDX39A-215ENST00000590696 TUBA1BP68363 451 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 TUBA4AP68366 448 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 HOXC5Q00444 222 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 GGTLC2Q14390 218 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 ANKRD16Q6P6B7 361 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 TUBA1AQ71U36 451 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 OR9I1Q8NGQ6 314 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 OR52B2Q96RD2 323 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 VRK1Q99986 396 aaPredicted RBP18.94■□□□□ 0.62
DDX39A-215ENST00000590696 LINC00470Q9BZP3 86 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 CRNNQ9UBG3 495 aaPredicted RBP18.94■□□□□ 0.62
DDX39A-215ENST00000590696 LPAR3Q9UBY5 353 aa18.94■□□□□ 0.62
DDX39A-215ENST00000590696 ARFGEF3Q5TH69 2177 aa18.93■□□□□ 0.62
DDX39A-215ENST00000590696 NDUFS8O00217 210 aa18.93■□□□□ 0.62
DDX39A-215ENST00000590696 UBDO15205 165 aa18.93■□□□□ 0.62
DDX39A-215ENST00000590696 LMX1BO60663 402 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms