RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	C11orf44	Q8N8P7	122 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	OR9K2	Q8NGE7	335 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	ADAMTS15	Q8TE58	950 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	ZNF837	Q96EG3	531 aa	Predicted RBP	5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	TBX15	Q96SF7	602 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	BTBD2	Q9BX70	525 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	EBPL	Q9BY08	206 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	NMUR2	Q9GZQ4	415 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	DENND2D	Q9H6A0	471 aa	Predicted RBP	5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	PATZ1	Q9HBE1	687 aa	Known RBP	5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	DECR2	Q9NUI1	292 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	NSMCE4A	Q9NXX6	385 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	CHRNA9	Q9UGM1	479 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	ZNF225	Q9UK10	706 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	SNX6	Q9UNH7	406 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	KCNE3	Q9Y6H6	103 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619		U3KQK5	164 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	DSPP	Q9NZW4	1301 aa		5.41	□□□□□ -1.54
DNMT1-222	ENST00000590619	TET2	Q6N021	2002 aa	Predicted RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	TRAV40	A0A0B4J280	105 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	RPL36A-HNRNPH2	H7BZ11	118 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	TPD52L2	O43399	206 aa	Known RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	CYP7B1	O75881	506 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	URI1	O94763	535 aa	Predicted RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	UBOX5	O94941	541 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	SFTPB	P07988	381 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	ANXA4	P09525	319 aa	Predicted RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	IGLL1	P15814	213 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	ZNF14	P17017	642 aa	Predicted RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	TSPAN8	P19075	237 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	FKBP2	P26885	142 aa	Known RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	IER3	P46695	156 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	FNTA	P49354	379 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	CCR4	P51679	360 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	ROR2	Q01974	943 aa	Known RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	BTK	Q06187	659 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	PIGF	Q07326	219 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	ILF2	Q12905	390 aa	Known RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	HSPB3	Q12988	150 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	NKPD1	Q17RQ9	610 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	TRMT5	Q32P41	509 aa	Known RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	PRAMEF8	Q5VWM4	474 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	PRAMEF7	Q5VXH5	474 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	CDC73	Q6P1J9	531 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	PGBD2	Q6P3X8	592 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	ZCCHC12	Q6PEW1	402 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	LRRN1	Q6UXK5	716 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619		Q6ZTK2	550 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	CREB3L2	Q70SY1	520 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	CMIP	Q8IY22	773 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	CENPL	Q8N0S6	344 aa	Predicted RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	PDIK1L	Q8N165	341 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	TMCO5A	Q8N6Q1	288 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	COX18	Q8N8Q8	333 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	WFDC9	Q8NEX5	89 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	KIF18A	Q8NI77	898 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	TBC1D15	Q8TC07	691 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	SSMEM1	Q8WWF3	244 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	TMEM234	Q8WY98	164 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	CFHR4	Q92496	578 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	CDS1	Q92903	461 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	PHF21B	Q96EK2	531 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	GPR78	Q96P69	363 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	ALKBH3	Q96Q83	286 aa	Predicted RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	DCLRE1C	Q96SD1	692 aa	Known RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	DIRC2	Q96SL1	478 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	DESI2	Q9BSY9	194 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	SF3B5	Q9BWJ5	86 aa	Known RBP	5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	TOR3A	Q9H497	397 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	SERHL2	Q9H4I8	314 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	PIF1	Q9H611	641 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	DCAF16	Q9NXF7	216 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	KCNE5	Q9UJ90	142 aa		5.4	□□□□□ -1.54
DNMT1-222	ENST00000590619	DNAH7	Q8WXX0	4024 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	CSMD3	Q7Z407	3707 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	IGLV3-9	A0A075B6K5	115 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	KIR2DS1	A0A191URI9	304 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619		A8MXK9	166 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	MANBA	O00462	879 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	TNFRSF13B	O14836	293 aa	Predicted RBP	5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	AKR7A3	O95154	331 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	IGHV2-70	P01814	119 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	IGHV4-59	P01825	116 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	HLA-H	P01893	362 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	NHLRC4	P0CG21	123 aa	Predicted RBP	5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	UBL4A	P11441	157 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	HSD3B1	P14060	373 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	ZNF250	P15622	560 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	ATP6V1C1	P21283	382 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	HSD3B2	P26439	372 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	CRABP2	P29373	138 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	NTS	P30990	170 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	MSX2	P35548	267 aa	Predicted RBP	5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	CAPZA2	P47755	286 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	CDH13	P55290	713 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	BPIFB3	P59826	476 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	SKP2	Q13309	424 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	CDK5R2	Q13319	367 aa		5.39	□□□□□ -1.55
DNMT1-222	ENST00000590619	FASTKD3	Q14CZ7	662 aa	Known RBP	5.39	□□□□□ -1.55

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